Detailed information NTG0378754

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FTO60_RS06970
• Genome accession: NZ_CP042819
• Coordinates: 1408957..1410054 (+)
• Length: 365 a.a.
• NCBI ID: WP_148055279.1
• Uniprot ID: A0A5B9ESI6
• Organism: Octadecabacter sp. SW4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1403957..1415054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FTO60_RS06945 (FTO60_06945)	-	1405697..1406415 (+)	719	Protein_1389	alanyl-tRNA editing protein	-
FTO60_RS06950 (FTO60_06950)	-	1406412..1406777 (+)	366	WP_148055276.1	hypothetical protein	-
FTO60_RS06960 (FTO60_06960)	-	1406974..1408116 (-)	1143	WP_148055277.1	lytic murein transglycosylase	-
FTO60_RS06965 (FTO60_06965)	-	1408154..1408750 (-)	597	WP_148055278.1	gamma-glutamyl kinase	-
FTO60_RS06970 (FTO60_06970)	recA	1408957..1410054 (+)	1098	WP_148055279.1	recombinase RecA	Machinery gene
FTO60_RS06975 (FTO60_06975)	alaS	1410178..1412826 (+)	2649	WP_148055280.1	alanine--tRNA ligase	-
FTO60_RS06980 (FTO60_06980)	-	1412823..1413110 (+)	288	WP_148055281.1	DUF1330 domain-containing protein	-
FTO60_RS06985 (FTO60_06985)	-	1413116..1413901 (-)	786	WP_368074264.1	DUF6639 family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 38891.31 Da
• Isoelectric Point: 4.9718

>NTDB_id=378754 FTO60_RS06970 WP_148055279.1 1408957..1410054(+) (recA) [Octadecabacter sp. SW4]
MATAELLSMTDKKSADKQKALDSALAQIERQFGKGSIMKLGGDNVLADIEATSTGSLGLDIALGIGGIPKGRIVEIYGPE
SSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPQYARKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSMIVVDSVAA
LTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSIHRTNCTVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GALKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELLDLGVKAGIVEKSGAWFSYGDERIGQGRENSKVF
LKDNPGIANEIEDKIRAAHGLDFDGAEPAPKIAANDSDDDALIDV

Nucleotide

• Length: 1098 bp

>NTDB_id=378754 FTO60_RS06970 WP_148055279.1 1408957..1410054(+) (recA) [Octadecabacter sp. SW4]
ATGGCAACGGCAGAACTTCTCAGCATGACCGACAAGAAATCAGCAGACAAACAAAAGGCGCTTGATAGCGCGCTGGCCCA
GATCGAGCGGCAGTTCGGCAAGGGCTCGATCATGAAACTGGGCGGCGACAACGTGCTGGCCGACATCGAGGCGACCTCGA
CCGGTTCCCTGGGCCTTGATATCGCGCTTGGCATCGGTGGCATTCCCAAGGGGCGCATCGTTGAAATCTACGGGCCGGAA
TCATCGGGGAAAACCACGCTGACCCTGCATTGCGTCGCCGAAGAACAGAAAAAGGGCGGGGTTTGCGCATTCGTTGATGC
TGAACACGCGCTTGACCCGCAATATGCCCGCAAGCTGGGTGTGAACCTGGACGAATTGCTGATCTCGCAGCCCGACACGG
GCGAGCAGGCGCTGGAAATCGTTGACACTCTGGTGCGCTCGGGTGCGGTGTCGATGATCGTCGTCGATAGTGTCGCGGCG
CTGACACCGAAATCCGAACTTGAAGGCGATATGGGCGACAGCAGCGTTGGTGTGCATGCCCGCCTGATGTCACAGGCCAT
GCGCAAGCTGACCGGATCAATCCACCGCACCAACTGCACGGTCGTGTTCATCAACCAGATCCGCATGAAAATCGGCGTGA
TGTTCGGCAGCCCCGAAACCACGACCGGCGGCAATGCGTTGAAATTCTACTCTTCCGTGCGTCTGGACATCCGCCGCATC
GGTGCCCTGAAAGACCGTGACGAGGTTGTCGGCAACGCCACCCGCGTCAAGGTCGTGAAAAACAAAGTTGCACCGCCGTT
CAAACAGGTGGAGTTCGACATCATGTATGGCGAAGGGATTTCCAAGACCGGCGAACTGCTTGATCTGGGCGTCAAGGCGG
GGATCGTCGAAAAATCCGGTGCGTGGTTTTCATACGGCGATGAGCGGATCGGGCAGGGGCGTGAAAACTCCAAGGTGTTC
CTCAAGGATAACCCGGGCATCGCAAACGAGATCGAAGACAAGATTCGCGCGGCGCACGGGCTTGATTTTGATGGTGCAGA
ACCTGCCCCGAAAATCGCCGCCAATGACAGCGATGATGACGCGTTGATCGACGTCTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (19-281)

3D structure

• AlphaFold DB: A0A5B9ESI6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	68.696	94.521	0.649
recA	Ralstonia pseudosolanacearum GMI1000	71.171	91.233	0.649
recA	Neisseria gonorrhoeae strain FA1090	71.515	90.411	0.647
recA	Neisseria gonorrhoeae MS11	71.515	90.411	0.647
recA	Neisseria gonorrhoeae MS11	71.515	90.411	0.647
recA	Pseudomonas stutzeri DSM 10701	70.186	88.219	0.619
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.689	93.425	0.614
recA	Vibrio cholerae strain A1552	69.47	87.945	0.611
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.47	87.945	0.611
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.683	89.863	0.608
recA	Acinetobacter baylyi ADP1	68.847	87.945	0.605
recA	Acinetobacter baumannii D1279779	68.847	87.945	0.605
recA	Bacillus subtilis subsp. subtilis str. 168	65.861	90.685	0.597
recA	Helicobacter pylori strain NCTC11637	65.951	89.315	0.589
recA	Streptococcus mitis NCTC 12261	58.791	99.726	0.586
recA	Helicobacter pylori 26695	65.337	89.315	0.584
recA	Streptococcus pneumoniae TIGR4	58.496	98.356	0.575
recA	Streptococcus pneumoniae Rx1	58.496	98.356	0.575
recA	Streptococcus pneumoniae D39	58.496	98.356	0.575
recA	Streptococcus pneumoniae R6	58.496	98.356	0.575
recA	Lactococcus lactis subsp. cremoris KW2	61.652	92.877	0.573
recA	Streptococcus mitis SK321	59.885	95.616	0.573
recA	Streptococcus pyogenes NZ131	56.787	98.904	0.562
recA	Latilactobacillus sakei subsp. sakei 23K	62.27	89.315	0.556
recA	Streptococcus mutans UA159	59.941	92.329	0.553
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.467	92.603	0.551