Detailed information NTG0037525

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: TRAD_RS10675
• Genome accession: NC_014221
• Coordinates: 2330415..2331497 (+)
• Length: 360 a.a.
• NCBI ID: WP_013178626.1
• Uniprot ID: -
• Organism: Truepera radiovictrix DSM 17093
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2325415..2336497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRAD_RS15345 (Trad_2147)	-	2326924..2328879 (+)	1956	WP_013178624.1	sodium:proton antiporter	-
TRAD_RS10670 (Trad_2148)	-	2328960..2330198 (+)	1239	WP_013178625.1	competence/damage-inducible protein A	-
TRAD_RS10675 (Trad_2149)	recA	2330415..2331497 (+)	1083	WP_013178626.1	recombinase RecA	Machinery gene
TRAD_RS10680 (Trad_2150)	rny	2331497..2333167 (+)	1671	WP_013178627.1	ribonuclease Y	-
TRAD_RS10685 (Trad_2151)	-	2333417..2334358 (+)	942	WP_013178628.1	ribose-phosphate pyrophosphokinase	-
TRAD_RS10690 (Trad_2152)	-	2334389..2335015 (+)	627	WP_013178629.1	50S ribosomal protein L25	-
TRAD_RS10695 (Trad_2153)	pth	2334996..2335598 (+)	603	WP_013178630.1	aminoacyl-tRNA hydrolase	-
TRAD_RS10700 (Trad_2154)	-	2335595..2336038 (-)	444	WP_013178631.1	arsenate reductase ArsC	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 38084.47 Da
• Isoelectric Point: 6.1722

>NTDB_id=37525 TRAD_RS10675 WP_013178626.1 2330415..2331497(+) (recA) [Truepera radiovictrix DSM 17093]
MKDTDNPSAPSGAPPQLDPARRRSLESTLSQIEKQFGKGAIMRLGDDRSLLDQGVIPTGSMSVDLALGVGGVPRGRIIEI
YGPESGGKTTLSLHVIAEAQRLGGVAAFVDAEHALDPTYAKALGVDTDELLVSQPDTGEQALEITELLVRSGAVDVVVVD
SVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGALAKSRTTAIFINQIREKIGVMYGNPETTPGGRALKFYASVRLE
VRRKGDVKSGADKVGNQVRVKVTKNKVAPPFKEAEVEILFGKGIDKLGDLITIATDLDLIQKSGSFYKYDGVTIGQGKEK
AASYLLDNPHLIDALRQRVVAAVRGGAEAGDEVDALRGGA

Nucleotide

• Length: 1083 bp

>NTDB_id=37525 TRAD_RS10675 WP_013178626.1 2330415..2331497(+) (recA) [Truepera radiovictrix DSM 17093]
ATGAAGGACACCGACAATCCCTCCGCCCCCTCGGGGGCGCCACCACAGCTCGACCCCGCACGGCGGCGGAGCCTGGAGAG
CACGCTGTCGCAGATCGAGAAGCAGTTCGGCAAGGGCGCCATCATGCGCCTCGGCGACGACCGCTCGCTACTCGACCAGG
GCGTCATCCCCACCGGCTCGATGTCCGTCGACCTCGCCCTGGGCGTCGGCGGCGTCCCCAGAGGCCGCATCATCGAGATC
TACGGCCCCGAGTCCGGCGGCAAAACCACCCTCTCCTTGCACGTCATCGCCGAAGCCCAGCGCCTGGGCGGCGTCGCCGC
TTTTGTCGACGCCGAGCACGCGCTCGACCCCACCTACGCCAAAGCCCTGGGCGTCGACACCGACGAACTCCTCGTCTCCC
AACCCGACACCGGCGAGCAAGCTTTGGAGATCACCGAGCTCCTGGTCCGCTCCGGCGCGGTCGACGTGGTGGTGGTCGAC
TCGGTCGCCGCTTTGGTCCCCAGAGCCGAGATCGAGGGCGAGATGGGCGACGCCCACGTCGGTCTGCAAGCCCGGCTCAT
GAGCCAAGCCCTGCGCAAGCTCACCGGCGCGCTCGCCAAAAGCCGCACCACCGCCATTTTCATCAACCAGATCCGCGAAA
AGATCGGCGTCATGTACGGCAACCCCGAGACCACCCCGGGGGGGCGGGCGCTCAAGTTCTACGCCTCGGTCCGTTTGGAG
GTCCGCCGCAAGGGCGACGTCAAGTCCGGCGCCGACAAGGTCGGCAACCAGGTGCGGGTCAAGGTGACCAAGAACAAGGT
GGCCCCGCCCTTTAAAGAAGCCGAGGTCGAGATCCTCTTCGGCAAAGGCATCGACAAGCTCGGCGACCTCATCACCATCG
CCACCGACTTAGACCTCATCCAAAAGTCCGGCTCCTTTTACAAGTACGACGGCGTTACCATCGGTCAGGGCAAGGAAAAA
GCCGCTAGCTACCTCCTCGACAACCCCCACCTCATCGACGCTTTGCGCCAACGCGTCGTCGCCGCCGTCCGGGGGGGGGC
GGAAGCCGGGGATGAGGTGGACGCCCTGCGTGGGGGCGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (24-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	65.698	95.556	0.628
recA	Pseudomonas stutzeri DSM 10701	64.417	90.556	0.583
recA	Bacillus subtilis subsp. subtilis str. 168	64.89	88.611	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	63.272	90	0.569
recA	Streptococcus mitis NCTC 12261	62.539	89.722	0.561
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.229	89.722	0.558
recA	Streptococcus pyogenes NZ131	62.229	89.722	0.558
recA	Streptococcus mitis SK321	62.229	89.722	0.558
recA	Vibrio cholerae strain A1552	62.229	89.722	0.558
recA	Streptococcus pneumoniae R6	61.92	89.722	0.556
recA	Streptococcus pneumoniae Rx1	61.92	89.722	0.556
recA	Streptococcus pneumoniae D39	61.92	89.722	0.556
recA	Streptococcus pneumoniae TIGR4	61.92	89.722	0.556
recA	Acinetobacter baylyi ADP1	58.187	95	0.553
recA	Glaesserella parasuis strain SC1401	58.235	94.444	0.55
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.494	90	0.544
recA	Streptococcus mutans UA159	60.681	89.722	0.544
recA	Acinetobacter baumannii D1279779	60.372	89.722	0.542
recA	Helicobacter pylori 26695	58.559	92.5	0.542
recA	Helicobacter pylori strain NCTC11637	58.559	92.5	0.542
recA	Neisseria gonorrhoeae MS11	62.701	86.389	0.542
recA	Neisseria gonorrhoeae MS11	62.701	86.389	0.542
recA	Neisseria gonorrhoeae strain FA1090	62.701	86.389	0.542
recA	Lactococcus lactis subsp. cremoris KW2	58.282	90.556	0.528
recA	Ralstonia pseudosolanacearum GMI1000	61.364	85.556	0.525
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.716	90	0.519