Detailed information NTG0037520

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: TRAD_RS03460
• Genome accession: NC_014221
• Coordinates: 756327..757406 (-)
• Length: 359 a.a.
• NCBI ID: WP_013177198.1
• Uniprot ID: -
• Organism: Truepera radiovictrix DSM 17093
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 751327..762406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRAD_RS03430 (Trad_0684)	wecB	751510..752625 (+)	1116	WP_013177192.1	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	-
TRAD_RS15035 (Trad_0685)	-	752663..753265 (-)	603	WP_013177193.1	glycerol-3-phosphate acyltransferase	-
TRAD_RS03440 (Trad_0686)	recO	753275..754048 (-)	774	WP_013177194.1	DNA repair protein RecO	-
TRAD_RS03445 (Trad_0687)	-	754170..755501 (+)	1332	WP_013177195.1	HAMP domain-containing sensor histidine kinase	-
TRAD_RS03450 (Trad_0688)	-	755553..756086 (+)	534	WP_013177196.1	DUF5872 domain-containing protein	-
TRAD_RS03455 (Trad_0689)	-	756083..756322 (-)	240	WP_013177197.1	hypothetical protein	-
TRAD_RS03460 (Trad_0690)	recA	756327..757406 (-)	1080	WP_013177198.1	recombinase RecA	Machinery gene
TRAD_RS03465 (Trad_0691)	-	757568..759004 (+)	1437	WP_013177199.1	PAS domain S-box protein	-
TRAD_RS03470 (Trad_0692)	-	759330..760484 (-)	1155	WP_013177200.1	Gfo/Idh/MocA family oxidoreductase	-
TRAD_RS03475 (Trad_0693)	-	760621..761625 (-)	1005	WP_013177201.1	sugar phosphate isomerase/epimerase family protein	-

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 38110.55 Da
• Isoelectric Point: 6.5188

>NTDB_id=37520 TRAD_RS03460 WP_013177198.1 756327..757406(-) (recA) [Truepera radiovictrix DSM 17093]
MSQVDPQPDPQRTALDPARRRSLESTLSQIEKQFGKGAIMRLGDDRSLLDQGVIPTGSMSVDLALGVGGVPRGRIIEIYG
PESGGKTTLSLHVIAEAQRLGGVAAFVDAEHALDPTYAKALGVDTDELLVSQPDTGEQALEITELLVRSGAVDVVVVDSV
AALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGALAKSRTTAIFINQIREKIGVMYGNPETTPGGRALKFYASVRLEVR
RKGDVKSGADKVGNQVRVKVTKNKVAPPFKEAEVEILFGKGIDKLGDLITIATDLDLIQKSGSFYKYDGVTIGQGKEKAA
SYLLDNPHLIDALRQRVVAAVRGGAATPSLADAEPSAAQ

Nucleotide

• Length: 1080 bp

>NTDB_id=37520 TRAD_RS03460 WP_013177198.1 756327..757406(-) (recA) [Truepera radiovictrix DSM 17093]
ATGTCCCAAGTAGACCCGCAACCCGACCCTCAGCGCACCGCCCTCGACCCCGCACGGCGGCGGAGCCTGGAGAGCACGCT
GTCGCAGATCGAGAAGCAGTTCGGCAAGGGCGCCATCATGCGCCTCGGCGACGACCGCTCGCTACTCGACCAGGGCGTTA
TCCCCACCGGCTCGATGTCCGTCGACCTCGCCCTGGGCGTCGGCGGCGTCCCCAGAGGCCGCATCATCGAGATCTACGGC
CCCGAGTCCGGCGGCAAAACCACCCTCTCCTTGCACGTCATCGCCGAAGCCCAGCGCCTCGGCGGCGTCGCCGCCTTTGT
CGACGCCGAGCACGCGCTCGACCCCACCTACGCTAAAGCCCTGGGCGTCGACACCGACGAACTCCTCGTCTCCCAACCCG
ACACCGGCGAGCAAGCTCTAGAGATCACCGAGCTCCTGGTCCGCTCCGGCGCGGTCGACGTGGTGGTGGTCGACTCGGTC
GCCGCTTTGGTCCCCAGAGCCGAGATCGAGGGCGAGATGGGCGACGCCCACGTCGGTCTGCAAGCCCGGCTCATGAGCCA
AGCCCTGCGCAAGCTCACCGGCGCGCTCGCCAAAAGCCGCACCACCGCCATTTTCATCAACCAGATCCGCGAAAAGATCG
GCGTCATGTACGGCAACCCCGAGACCACCCCGGGGGGGCGGGCGCTCAAGTTCTACGCCTCGGTCCGTTTGGAGGTCCGC
CGCAAGGGCGACGTCAAGTCGGGCGCCGACAAGGTCGGCAACCAGGTGCGGGTCAAGGTGACCAAGAACAAGGTGGCCCC
GCCCTTTAAAGAAGCCGAGGTCGAGATCCTCTTCGGCAAAGGCATCGACAAGCTCGGCGACCTCATCACCATCGCCACCG
ACTTAGACCTCATCCAAAAGTCCGGCTCCTTTTACAAGTACGACGGCGTTACCATCGGTCAGGGCAAGGAAAAAGCCGCT
AGCTACCTCCTCGACAACCCCCACCTCATCGACGCCTTGCGCCAACGCGTCGTCGCCGCCGTCCGGGGGGGGGCGGCGAC
GCCCAGCCTCGCGGACGCGGAGCCGAGCGCCGCGCAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (22-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	67.584	91.086	0.616
recA	Pseudomonas stutzeri DSM 10701	62.356	96.936	0.604
recA	Bacillus subtilis subsp. subtilis str. 168	64.89	88.858	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	63.272	90.251	0.571
recA	Streptococcus mitis NCTC 12261	62.539	89.972	0.563
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.229	89.972	0.56
recA	Streptococcus pyogenes NZ131	62.229	89.972	0.56
recA	Vibrio cholerae strain A1552	62.229	89.972	0.56
recA	Streptococcus mitis SK321	62.229	89.972	0.56
recA	Streptococcus pneumoniae D39	61.92	89.972	0.557
recA	Streptococcus pneumoniae Rx1	61.92	89.972	0.557
recA	Streptococcus pneumoniae R6	61.92	89.972	0.557
recA	Streptococcus pneumoniae TIGR4	61.92	89.972	0.557
recA	Acinetobacter baylyi ADP1	57.681	96.1	0.554
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.494	90.251	0.546
recA	Streptococcus mutans UA159	60.681	89.972	0.546
recA	Helicobacter pylori 26695	59.271	91.643	0.543
recA	Helicobacter pylori strain NCTC11637	59.271	91.643	0.543
recA	Acinetobacter baumannii D1279779	60.372	89.972	0.543
recA	Neisseria gonorrhoeae MS11	62.701	86.63	0.543
recA	Neisseria gonorrhoeae strain FA1090	62.701	86.63	0.543
recA	Neisseria gonorrhoeae MS11	62.701	86.63	0.543
recA	Glaesserella parasuis strain SC1401	60.815	88.858	0.54
recA	Lactococcus lactis subsp. cremoris KW2	58.282	90.808	0.529
recA	Ralstonia pseudosolanacearum GMI1000	61.364	85.794	0.526
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.627	92.479	0.524