Detailed information NTG0037352

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GC56T3_RS11755
• Genome accession: NC_014206
• Coordinates: 2384338..2385153 (-)
• Length: 271 a.a.
• NCBI ID: WP_021322290.1
• Uniprot ID: -
• Organism: Geobacillus sp. C56-T3
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2382648..2384012	2384338..2385153	flank	326

Gene organization within MGE regions

Location: 2382648..2385153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GC56T3_RS11750 (GC56T3_2255)	-	2382648..2384012 (-)	1365	WP_013145704.1	ISLre2 family transposase	-
GC56T3_RS11755 (GC56T3_2256)	recA	2384338..2385153 (-)	816	WP_021322290.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 29695.82 Da
• Isoelectric Point: 4.9902

>NTDB_id=37352 GC56T3_RS11755 WP_021322290.1 2384338..2385153(-) (recA) [Geobacillus sp. C56-T3]
MKRGKIAPPGNAEGDYYLSLSLDPIYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEG
EMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIKQGNDM
VGNKTKIKVVKNKVAPPFKTADVDIMYGEGISREGEILDMASELDIVQKSGSWYSYKDERLGQGRENAKQFLKENPHIAD
EIARAIRQHYGIDVEEGTSEPQQDGFGLLEE

Nucleotide

• Length: 816 bp

>NTDB_id=37352 GC56T3_RS11755 WP_021322290.1 2384338..2385153(-) (recA) [Geobacillus sp. C56-T3]
GTGAAGCGGGGGAAAATAGCCCCTCCGGGTAATGCCGAGGGTGACTATTACCTATCGCTATCGCTCGACCCCATCTATGC
ACAAAAATTAGGGGTCAATATCGATGAATTGCTGCTTTCCCAGCCTGACACGGGCGAGCAGGCGCTCGAAATCGCGGAAG
CGCTCGTGCGAAGCGGCGCGGTCGATATTATCGTCATCGACTCGGTGGCGGCGCTTGTGCCGAAAGCGGAAATTGAAGGG
GAGATGGGCGACGCCCATGTCGGCTTGCAAGCGCGGCTTATGTCCCAGGCGCTTCGCAAGCTGTCTGGCGCCATTAACAA
ATCGAAAACGATCGCCATCTTCATCAACCAAATTCGCGAAAAAGTCGGCGTCATGTTTGGCAATCCGGAAACGACGCCGG
GCGGGCGGGCGCTCAAGTTTTACGCTTCCGTCCGCCTAGAGGTGCGCCGCGCCGAGCAAATTAAGCAAGGCAATGATATG
GTCGGCAACAAGACAAAAATTAAAGTCGTCAAAAACAAAGTTGCGCCGCCATTTAAAACGGCTGACGTCGACATTATGTA
CGGCGAAGGCATTTCCCGCGAAGGGGAAATTCTCGACATGGCGTCCGAATTGGACATCGTGCAAAAAAGCGGTTCGTGGT
ATTCGTACAAAGACGAGCGGCTTGGCCAAGGGCGGGAAAACGCGAAGCAATTTTTGAAGGAAAACCCGCACATCGCCGAT
GAGATCGCCCGCGCCATCCGCCAGCATTACGGCATCGACGTTGAAGAGGGAACGAGCGAACCGCAGCAAGACGGGTTCGG
ATTGCTTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	87.124	85.978	0.749
recA	Latilactobacillus sakei subsp. sakei 23K	74.494	91.144	0.679
recA	Streptococcus pneumoniae D39	67.857	92.989	0.631
recA	Streptococcus pneumoniae R6	67.857	92.989	0.631
recA	Streptococcus pneumoniae Rx1	67.857	92.989	0.631
recA	Streptococcus pneumoniae TIGR4	67.857	92.989	0.631
recA	Streptococcus mitis NCTC 12261	68.548	91.513	0.627
recA	Streptococcus mitis SK321	67.742	91.513	0.62
recA	Streptococcus mutans UA159	67.886	90.775	0.616
recA	Streptococcus pyogenes NZ131	69.362	86.716	0.601
recA	Lactococcus lactis subsp. cremoris KW2	67.373	87.085	0.587
recA	Ralstonia pseudosolanacearum GMI1000	68.103	85.609	0.583
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.094	86.347	0.579
recA	Neisseria gonorrhoeae MS11	62.753	91.144	0.572
recA	Neisseria gonorrhoeae strain FA1090	62.753	91.144	0.572
recA	Neisseria gonorrhoeae MS11	62.753	91.144	0.572
recA	Vibrio cholerae strain A1552	65.789	84.133	0.554
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.789	84.133	0.554
recA	Pseudomonas stutzeri DSM 10701	65.639	83.764	0.55
recA	Acinetobacter baumannii D1279779	64.629	84.502	0.546
recA	Glaesserella parasuis strain SC1401	64.758	83.764	0.542
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.09	85.978	0.542
recA	Helicobacter pylori 26695	62.931	85.609	0.539
recA	Helicobacter pylori strain NCTC11637	62.931	85.609	0.539
recA	Acinetobacter baylyi ADP1	63.319	84.502	0.535
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.332	82.288	0.513