Detailed information NTG0372898

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FN924_RS08725
• Genome accession: NZ_CP041666
• Coordinates: 1651691..1652737 (+)
• Length: 348 a.a.
• NCBI ID: WP_143893641.1
• Uniprot ID: A0A516KFS9
• Organism: Radiobacillus deserti strain TKL69
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1646691..1657737

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FN924_RS19710	-	1647041..1647307 (+)	267	WP_323368654.1	SDR family oxidoreductase	-
FN924_RS08700 (FN924_08700)	-	1647413..1647673 (+)	261	WP_143893633.1	DUF3243 domain-containing protein	-
FN924_RS08705 (FN924_08705)	-	1647913..1648704 (+)	792	WP_143893635.1	DUF3388 domain-containing protein	-
FN924_RS08710 (FN924_08710)	-	1648722..1649630 (+)	909	WP_143893637.1	RodZ domain-containing protein	-
FN924_RS08715 (FN924_08715)	pgsA	1649699..1650277 (+)	579	WP_143893639.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FN924_RS08720 (FN924_08720)	-	1650274..1651332 (+)	1059	WP_323368645.1	competence/damage-inducible protein A	-
FN924_RS19715	cinA	1651265..1651516 (+)	252	WP_323368646.1	CinA family protein	Machinery gene
FN924_RS08725 (FN924_08725)	recA	1651691..1652737 (+)	1047	WP_143893641.1	recombinase RecA	Machinery gene
FN924_RS08730 (FN924_08730)	rny	1652999..1654555 (+)	1557	WP_143893643.1	ribonuclease Y	-
FN924_RS08735 (FN924_08735)	-	1654682..1655479 (+)	798	WP_143893645.1	TIGR00282 family metallophosphoesterase	-
FN924_RS08740 (FN924_08740)	spoVS	1655586..1655846 (+)	261	WP_044157499.1	stage V sporulation protein SpoVS	-
FN924_RS08745 (FN924_08745)	miaB	1656066..1657646 (+)	1581	WP_143893647.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37802.86 Da
• Isoelectric Point: 4.7881

>NTDB_id=372898 FN924_RS08725 WP_143893641.1 1651691..1652737(+) (recA) [Radiobacillus deserti strain TKL69]
MSDRKQALDMALKQIEKQFGKGSIMKLGEQAEQKIATVPSGSLALDVALGVGGYPRGRVIEIYGPESSGKTTVSLHAIAE
AQRQGGQAAFIDAEHALDPVYARKLGVNVDELLLSQPDTGEQALEIAEALVRSGAVDMIVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKQGNDMVGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISREGELLDIGSDLDIVLKSGAWYSYNEERLGQGRENAKQFLKENEDVSLEIYNA
IRNHYDMDTLAPEAGEESQEGQEALELE

Nucleotide

• Length: 1047 bp

>NTDB_id=372898 FN924_RS08725 WP_143893641.1 1651691..1652737(+) (recA) [Radiobacillus deserti strain TKL69]
TTGAGCGATCGTAAACAAGCCTTAGATATGGCGTTAAAACAAATAGAAAAACAGTTCGGTAAAGGTTCTATTATGAAACT
AGGGGAACAAGCAGAGCAAAAAATCGCAACGGTTCCAAGTGGATCATTAGCTTTAGATGTTGCACTAGGAGTTGGAGGAT
ATCCAAGAGGAAGGGTTATTGAAATTTATGGTCCTGAATCTTCTGGTAAAACAACTGTTTCTTTACATGCGATTGCGGAA
GCTCAACGTCAAGGTGGCCAAGCTGCATTTATTGATGCAGAGCATGCACTAGATCCCGTTTATGCTAGAAAATTAGGTGT
AAATGTAGACGAATTACTATTATCTCAACCAGATACAGGAGAGCAAGCACTTGAAATTGCCGAAGCGTTAGTACGAAGTG
GTGCAGTTGATATGATTGTTATTGACTCGGTTGCTGCACTTGTACCAAAAGCAGAGATTGAAGGAGAGATGGGAGATTCT
CACGTAGGTCTTCAAGCTCGTCTTATGTCTCAAGCTTTACGTAAACTGTCTGGTGCAATCAACAAATCCAAAACTACGGC
TATCTTTATTAACCAAATTCGTGAAAAGGTCGGAGTAATGTTCGGTAATCCAGAAACAACACCTGGTGGACGTGCGCTTA
AATTCTACTCCTCTGTTCGATTGGAAGTACGTCGTGCGGAAACCTTGAAGCAAGGAAATGACATGGTCGGAAACAAAACA
AAAATTAAAGTTGTGAAAAACAAAGTTGCCCCTCCTTTCCGTACAGCAGAAGTAGACATTATGTATGGAGAAGGAATCTC
TAGAGAGGGAGAGCTTCTCGATATCGGTTCGGATTTGGACATCGTATTAAAGAGTGGTGCTTGGTACTCTTATAATGAGG
AACGACTTGGACAAGGTAGAGAAAATGCGAAGCAATTTTTAAAAGAGAACGAAGATGTTTCGTTGGAAATTTACAACGCT
ATCCGTAACCATTATGATATGGATACGTTAGCACCTGAAGCGGGAGAAGAATCACAAGAAGGACAAGAGGCTTTAGAATT
AGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (6-267)

3D structure

• AlphaFold DB: A0A516KFS9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	86.018	94.54	0.813
recA	Latilactobacillus sakei subsp. sakei 23K	72.81	95.115	0.693
recA	Streptococcus mutans UA159	67.246	99.138	0.667
recA	Streptococcus mitis SK321	69.697	94.828	0.661
recA	Streptococcus mitis NCTC 12261	69.394	94.828	0.658
recA	Streptococcus pneumoniae Rx1	69.394	94.828	0.658
recA	Streptococcus pneumoniae D39	69.394	94.828	0.658
recA	Streptococcus pneumoniae R6	69.394	94.828	0.658
recA	Streptococcus pneumoniae TIGR4	69.394	94.828	0.658
recA	Streptococcus pyogenes NZ131	69.419	93.966	0.652
recA	Ralstonia pseudosolanacearum GMI1000	63.636	100	0.644
recA	Lactococcus lactis subsp. cremoris KW2	68.615	93.391	0.641
recA	Neisseria gonorrhoeae strain FA1090	64.223	97.989	0.629
recA	Neisseria gonorrhoeae MS11	64.223	97.989	0.629
recA	Neisseria gonorrhoeae MS11	64.223	97.989	0.629
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.45	98.276	0.624
recA	Glaesserella parasuis strain SC1401	65.312	91.954	0.601
recA	Helicobacter pylori strain NCTC11637	61.176	97.701	0.598
recA	Helicobacter pylori 26695	61.176	97.701	0.598
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.688	91.954	0.595
recA	Vibrio cholerae strain A1552	64.688	91.954	0.595
recA	Pseudomonas stutzeri DSM 10701	64.062	91.954	0.589
recA	Acinetobacter baylyi ADP1	63.158	92.816	0.586
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.27	93.678	0.583
recA	Acinetobacter baumannii D1279779	62.813	91.954	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.25	91.954	0.563