Detailed information NTG0372821

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FNT16_RS03495
• Genome accession: NZ_CP041660
• Coordinates: 871372..872415 (-)
• Length: 347 a.a.
• NCBI ID: WP_143870239.1
• Uniprot ID: -
• Organism: Catenovulum sediminis strain WS1-A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 866372..877415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNT16_RS03470	ubiH	867247..868461 (-)	1215	WP_143870236.1	2-octaprenyl-6-methoxyphenyl hydroxylase	-
FNT16_RS03475	pepP	868458..869785 (-)	1328	Protein_677	Xaa-Pro aminopeptidase	-
FNT16_RS03480	-	869830..870420 (-)	591	WP_143870237.1	UPF0149 family protein	-
FNT16_RS03490	-	870852..871181 (-)	330	WP_143870238.1	hypothetical protein	-
FNT16_RS03495	recA	871372..872415 (-)	1044	WP_143870239.1	recombinase RecA	Machinery gene
FNT16_RS03500	-	872573..873415 (-)	843	WP_143870240.1	hypothetical protein	-
FNT16_RS03505	-	874276..874779 (-)	504	WP_143870241.1	CinA family protein	-
FNT16_RS03510	mutS	874815..877403 (+)	2589	WP_143870242.1	DNA mismatch repair protein MutS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37275.86 Da
• Isoelectric Point: 5.1875

>NTDB_id=372821 FNT16_RS03495 WP_143870239.1 871372..872415(-) (recA) [Catenovulum sediminis strain WS1-A]
MSDNKQKALSAALGQIERQFGKGSIMKLGDNSALDIESISTGSLSLDIALGIGGLPCGRVVEIFGPESSGKTTLTLQTIA
EAQKKGKTCAFVDAEHALDPLYAEKLGVNIDELLVSQPDTGEQALEIADMLVRSGAVDVIIVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLTANIKKSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVTGSE
TRVKVVKNKVAPPFRQADFQIMYGRGISKEGELLDLGVKEGLIDKSGAWYSYQGNKIGQGKANCIKFMLENVEMANEVEA
ILRERLLLPTKKDAAIAEEKLTEATGE

Nucleotide

• Length: 1044 bp

>NTDB_id=372821 FNT16_RS03495 WP_143870239.1 871372..872415(-) (recA) [Catenovulum sediminis strain WS1-A]
ATGAGCGACAACAAACAAAAAGCCCTTAGTGCAGCATTAGGACAAATCGAGCGTCAATTTGGTAAAGGTTCGATTATGAA
GTTGGGTGATAACTCAGCATTGGACATTGAAAGTATTTCAACAGGCTCACTAAGCTTAGACATAGCGCTAGGTATAGGTG
GTTTACCTTGTGGTCGTGTTGTGGAAATCTTTGGCCCAGAATCTTCTGGTAAAACAACTTTAACTTTGCAGACAATTGCA
GAAGCTCAGAAAAAAGGCAAAACCTGTGCGTTTGTGGATGCTGAGCATGCACTTGATCCTTTGTATGCAGAGAAGCTAGG
CGTTAATATTGACGAATTATTGGTTTCTCAACCAGATACCGGTGAACAGGCGTTAGAAATTGCAGATATGTTGGTTCGCT
CAGGTGCGGTGGATGTGATTATTGTTGACTCGGTCGCCGCGTTAACACCAAAAGCTGAAATCGAAGGCGAAATGGGCGAT
ACCCATGTTGGTTTGCAGGCTCGACTTATGTCGCAAGCGTTACGTAAGTTAACAGCCAATATTAAAAAATCAAACACGCT
ATGTATTTTTATCAACCAGATTCGAATGAAAATTGGTGTAATGTTTGGTAACCCTGAAACCACAACTGGTGGTAACGCAC
TTAAATTTTATGCGTCGGTGCGATTAGATATTCGTCGTACAGGCGCCGTGAAAGAAGGTGACGAAGTAACGGGTAGTGAG
ACTCGTGTAAAAGTGGTTAAAAATAAAGTAGCACCACCATTTAGACAAGCAGATTTCCAGATTATGTACGGACGTGGTAT
ATCAAAAGAAGGCGAATTGCTTGATTTAGGCGTTAAAGAAGGATTAATCGATAAATCAGGTGCTTGGTATAGCTATCAAG
GCAATAAAATTGGTCAGGGTAAAGCAAACTGTATTAAATTCATGCTTGAAAATGTTGAAATGGCTAACGAAGTTGAAGCT
ATTTTACGTGAACGTTTATTGCTACCCACTAAAAAGGATGCAGCTATCGCTGAAGAAAAATTAACCGAAGCTACAGGTGA
ATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	75.66	98.271	0.744
recA	Vibrio cholerae strain A1552	78.116	94.813	0.741
recA	Vibrio cholerae O1 biovar El Tor strain E7946	78.116	94.813	0.741
recA	Acinetobacter baylyi ADP1	72.566	97.695	0.709
recA	Glaesserella parasuis strain SC1401	75.617	93.372	0.706
recA	Acinetobacter baumannii D1279779	73.7	94.236	0.695
recA	Neisseria gonorrhoeae MS11	71.914	93.372	0.671
recA	Neisseria gonorrhoeae MS11	71.914	93.372	0.671
recA	Neisseria gonorrhoeae strain FA1090	71.914	93.372	0.671
recA	Ralstonia pseudosolanacearum GMI1000	70.679	93.372	0.66
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.458	91.931	0.611
recA	Bacillus subtilis subsp. subtilis str. 168	64.923	93.66	0.608
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.746	95.389	0.608
recA	Helicobacter pylori strain NCTC11637	62.385	94.236	0.588
recA	Helicobacter pylori 26695	62.385	94.236	0.588
recA	Streptococcus mitis NCTC 12261	59.13	99.424	0.588
recA	Streptococcus mitis SK321	59.701	96.542	0.576
recA	Streptococcus pneumoniae Rx1	60.671	94.524	0.573
recA	Streptococcus pneumoniae D39	60.671	94.524	0.573
recA	Streptococcus pneumoniae R6	60.671	94.524	0.573
recA	Streptococcus pneumoniae TIGR4	60.671	94.524	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.494	93.372	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	92.507	0.562
recA	Streptococcus mutans UA159	59.327	94.236	0.559
recA	Streptococcus pyogenes NZ131	57.879	95.101	0.55
recA	Lactococcus lactis subsp. cremoris KW2	58.824	93.084	0.548