Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | FGZ69_RS00405 | Genome accession | NZ_CP041657 |
| Coordinates | 67957..69018 (-) | Length | 353 a.a. |
| NCBI ID | WP_003598111.1 | Uniprot ID | A0A243PT23 |
| Organism | Lacticaseibacillus paracasei strain CBA3611 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 64050..97284 | 67957..69018 | within | 0 |
Gene organization within MGE regions
Location: 64050..97284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGZ69_RS00390 (FGZ69_00390) | - | 64050..65312 (-) | 1263 | WP_016379935.1 | helicase-related protein | - |
| FGZ69_RS00395 (FGZ69_00395) | - | 65340..65990 (+) | 651 | WP_012491283.1 | YigZ family protein | - |
| FGZ69_RS00400 (FGZ69_00400) | rny | 66084..67655 (-) | 1572 | WP_003657913.1 | ribonuclease Y | - |
| FGZ69_RS00405 (FGZ69_00405) | recA | 67957..69018 (-) | 1062 | WP_003598111.1 | recombinase RecA | Machinery gene |
| FGZ69_RS00410 (FGZ69_00410) | cinA | 69075..70316 (-) | 1242 | WP_012491282.1 | competence/damage-inducible protein A | Machinery gene |
| FGZ69_RS00420 (FGZ69_00420) | pgsA | 70691..71284 (-) | 594 | WP_003564171.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| FGZ69_RS00425 (FGZ69_00425) | - | 71281..72210 (-) | 930 | WP_003593861.1 | helix-turn-helix domain-containing protein | - |
| FGZ69_RS00430 (FGZ69_00430) | ymfI | 72297..73025 (-) | 729 | WP_003569514.1 | elongation factor P 5-aminopentanone reductase | - |
| FGZ69_RS00435 (FGZ69_00435) | yfmH | 73025..74317 (-) | 1293 | WP_126139143.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| FGZ69_RS00440 (FGZ69_00440) | yfmF | 74314..75576 (-) | 1263 | WP_012491281.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| FGZ69_RS00445 (FGZ69_00445) | - | 75585..77906 (-) | 2322 | WP_003604697.1 | DNA translocase FtsK | - |
| FGZ69_RS00450 (FGZ69_00450) | - | 78079..78489 (-) | 411 | WP_003564159.1 | DUF1149 family protein | - |
| FGZ69_RS00455 (FGZ69_00455) | trmL | 78616..79125 (-) | 510 | WP_003564157.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| FGZ69_RS00465 (FGZ69_00465) | - | 79380..80222 (-) | 843 | WP_012491280.1 | methyltransferase domain-containing protein | - |
| FGZ69_RS00470 (FGZ69_00470) | - | 80288..81235 (+) | 948 | WP_003564155.1 | magnesium transporter CorA family protein | - |
| FGZ69_RS00475 (FGZ69_00475) | - | 81475..82452 (+) | 978 | WP_024109435.1 | GMP reductase | - |
| FGZ69_RS00480 (FGZ69_00480) | rpsN | 82580..82849 (+) | 270 | WP_003564153.1 | 30S ribosomal protein S14 | - |
| FGZ69_RS00485 (FGZ69_00485) | - | 82961..83338 (-) | 378 | WP_014566472.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| FGZ69_RS00490 (FGZ69_00490) | - | 83610..84650 (+) | 1041 | WP_012491278.1 | lactonase family protein | - |
| FGZ69_RS00495 (FGZ69_00495) | - | 84853..85671 (+) | 819 | WP_014566471.1 | undecaprenyl-diphosphate phosphatase | - |
| FGZ69_RS00500 (FGZ69_00500) | - | 85693..86328 (+) | 636 | WP_003569480.1 | copper homeostasis protein CutC | - |
| FGZ69_RS00505 (FGZ69_00505) | - | 86485..87543 (+) | 1059 | WP_012491276.1 | FAD:protein FMN transferase | - |
| FGZ69_RS00510 (FGZ69_00510) | - | 87652..88554 (-) | 903 | WP_012491275.1 | RluA family pseudouridine synthase | - |
| FGZ69_RS00515 (FGZ69_00515) | - | 88554..89351 (-) | 798 | WP_003564146.1 | NAD kinase | - |
| FGZ69_RS00520 (FGZ69_00520) | - | 89353..90024 (-) | 672 | WP_003564145.1 | GTP pyrophosphokinase family protein | - |
| FGZ69_RS00525 (FGZ69_00525) | - | 90218..90811 (+) | 594 | WP_003601679.1 | CYTH domain-containing protein | - |
| FGZ69_RS00530 (FGZ69_00530) | - | 90881..91516 (+) | 636 | WP_003601677.1 | DsbA family protein | - |
| FGZ69_RS00535 (FGZ69_00535) | - | 91706..92761 (-) | 1056 | WP_003569473.1 | competence protein CoiA | - |
| FGZ69_RS00540 (FGZ69_00540) | - | 92871..94214 (-) | 1344 | WP_014951764.1 | PFL family protein | - |
| FGZ69_RS00545 (FGZ69_00545) | - | 94263..94529 (-) | 267 | WP_003564140.1 | ACT domain-containing protein | - |
| FGZ69_RS00550 (FGZ69_00550) | - | 94720..96048 (+) | 1329 | WP_012491272.1 | metallophosphoesterase | - |
| FGZ69_RS00555 (FGZ69_00555) | - | 96286..97284 (+) | 999 | WP_012490951.1 | IS30 family transposase | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 37745.94 Da Isoelectric Point: 5.8234
>NTDB_id=372783 FGZ69_RS00405 WP_003598111.1 67957..69018(-) (recA) [Lacticaseibacillus paracasei strain CBA3611]
MAGDERQKALDVALKKIEKNFGKGAIMRMGAKADTRVSVVSSGSLAVDDALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDELLLSQPDTGEQGLEIADELVASGAIDIVVIDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIIFGSPETTPGGRALKFYATVRLEIRRSEQIKTGADVVGN
RTKIKVVKNKVAPPFRTAIVDIMYGQGISQTGELVDMAVERDIVEKAGSWYAYQGERIGQGRENAKTYLDNHADLQQTIK
QQVRVAYGMAAAPGRETASVSEDQPEIHQQAEV
MAGDERQKALDVALKKIEKNFGKGAIMRMGAKADTRVSVVSSGSLAVDDALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDELLLSQPDTGEQGLEIADELVASGAIDIVVIDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIIFGSPETTPGGRALKFYATVRLEIRRSEQIKTGADVVGN
RTKIKVVKNKVAPPFRTAIVDIMYGQGISQTGELVDMAVERDIVEKAGSWYAYQGERIGQGRENAKTYLDNHADLQQTIK
QQVRVAYGMAAAPGRETASVSEDQPEIHQQAEV
Nucleotide
Download Length: 1062 bp
>NTDB_id=372783 FGZ69_RS00405 WP_003598111.1 67957..69018(-) (recA) [Lacticaseibacillus paracasei strain CBA3611]
ATGGCAGGAGACGAACGCCAGAAAGCATTGGATGTTGCACTGAAAAAGATTGAAAAAAATTTTGGTAAAGGCGCGATTAT
GCGAATGGGTGCTAAGGCGGACACGCGCGTTTCCGTTGTCTCTAGCGGCTCACTTGCCGTTGATGATGCACTTGGTGTTG
GGGGCTTTCCGCGCGGACGAATTGTCGAAATTTATGGACCGGAAAGTTCCGGCAAAACAACCGTCGCGCTGCATGCTGTT
GCTGAAGTGCAGAAGCAAGGCGGTACTGCCGCCTATATTGATGCCGAGAATGCGATGGATCCCAAGTACGCAACTGCTTT
GGGCGTCAATATTGACGAATTATTGCTCTCCCAGCCAGACACAGGCGAACAAGGGCTGGAGATTGCTGATGAACTAGTCG
CGTCTGGTGCCATTGATATTGTGGTGATTGATTCAGTTGCTGCTTTGGTGCCGCGGGCTGAGATTGAGGGCGATATGGGG
GATGCCCATGTTGGCTTGCAAGCCCGATTAATGTCACAGGCGTTACGTAAGTTATCCGGTTCCATCAATAAGACAAAAAC
GATTGCTTTATTCATTAATCAGATTCGTGAGAAAGTCGGGATCATTTTTGGGAGTCCGGAAACGACACCAGGTGGTCGCG
CATTGAAGTTTTATGCGACTGTTCGGTTAGAAATCCGGCGGTCGGAACAGATCAAGACAGGCGCAGATGTCGTCGGCAAT
CGCACTAAAATCAAAGTGGTCAAGAATAAGGTGGCACCGCCTTTTCGAACAGCAATTGTGGATATCATGTATGGCCAAGG
CATTTCGCAAACTGGCGAACTTGTCGACATGGCCGTTGAGAGAGATATTGTTGAAAAAGCAGGGTCATGGTACGCGTATC
AAGGTGAACGCATCGGCCAAGGTCGCGAAAACGCTAAGACATATCTTGATAACCACGCTGATCTTCAGCAGACGATTAAA
CAACAGGTTCGCGTGGCTTATGGTATGGCAGCCGCACCTGGTCGGGAGACGGCTTCGGTCAGTGAAGATCAACCCGAAAT
ACATCAACAGGCTGAAGTATGA
ATGGCAGGAGACGAACGCCAGAAAGCATTGGATGTTGCACTGAAAAAGATTGAAAAAAATTTTGGTAAAGGCGCGATTAT
GCGAATGGGTGCTAAGGCGGACACGCGCGTTTCCGTTGTCTCTAGCGGCTCACTTGCCGTTGATGATGCACTTGGTGTTG
GGGGCTTTCCGCGCGGACGAATTGTCGAAATTTATGGACCGGAAAGTTCCGGCAAAACAACCGTCGCGCTGCATGCTGTT
GCTGAAGTGCAGAAGCAAGGCGGTACTGCCGCCTATATTGATGCCGAGAATGCGATGGATCCCAAGTACGCAACTGCTTT
GGGCGTCAATATTGACGAATTATTGCTCTCCCAGCCAGACACAGGCGAACAAGGGCTGGAGATTGCTGATGAACTAGTCG
CGTCTGGTGCCATTGATATTGTGGTGATTGATTCAGTTGCTGCTTTGGTGCCGCGGGCTGAGATTGAGGGCGATATGGGG
GATGCCCATGTTGGCTTGCAAGCCCGATTAATGTCACAGGCGTTACGTAAGTTATCCGGTTCCATCAATAAGACAAAAAC
GATTGCTTTATTCATTAATCAGATTCGTGAGAAAGTCGGGATCATTTTTGGGAGTCCGGAAACGACACCAGGTGGTCGCG
CATTGAAGTTTTATGCGACTGTTCGGTTAGAAATCCGGCGGTCGGAACAGATCAAGACAGGCGCAGATGTCGTCGGCAAT
CGCACTAAAATCAAAGTGGTCAAGAATAAGGTGGCACCGCCTTTTCGAACAGCAATTGTGGATATCATGTATGGCCAAGG
CATTTCGCAAACTGGCGAACTTGTCGACATGGCCGTTGAGAGAGATATTGTTGAAAAAGCAGGGTCATGGTACGCGTATC
AAGGTGAACGCATCGGCCAAGGTCGCGAAAACGCTAAGACATATCTTGATAACCACGCTGATCTTCAGCAGACGATTAAA
CAACAGGTTCGCGTGGCTTATGGTATGGCAGCCGCACCTGGTCGGGAGACGGCTTCGGTCAGTGAAGATCAACCCGAAAT
ACATCAACAGGCTGAAGTATGA
Similar proteins
Only experimentally validated proteins are listed.