Detailed information NTG0372475

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: CVULP_RS05470
• Genome accession: NZ_CP041617
• Coordinates: 1056765..1057004 (-)
• Length: 79 a.a.
• NCBI ID: WP_099507826.1
• Uniprot ID: -
• Organism: Campylobacter vulpis strain 251/13
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1051765..1062004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVULP_RS05460 (CVULP_1065)	-	1052974..1053717 (+)	744	WP_099507831.1	efflux RND transporter periplasmic adaptor subunit	-
CVULP_RS05465 (CVULP_1066)	-	1053718..1056726 (+)	3009	WP_099507829.1	efflux RND transporter permease subunit	-
CVULP_RS05470 (CVULP_1067)	Cj0011c	1056765..1057004 (-)	240	WP_099507826.1	DUF655 domain-containing protein	Machinery gene
CVULP_RS05475 (CVULP_1068)	-	1057077..1057568 (-)	492	WP_099507823.1	histidine phosphatase family protein	-
CVULP_RS05480 (CVULP_1069)	-	1057565..1058101 (-)	537	WP_099461737.1	rhomboid family intramembrane serine protease	-
CVULP_RS05485 (CVULP_1070)	-	1058193..1058603 (+)	411	WP_099461735.1	PepSY-like domain-containing protein	-
CVULP_RS05490 (CVULP_1071)	-	1058600..1059283 (-)	684	WP_099507822.1	3-methyladenine DNA glycosylase	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8902.45 Da
• Isoelectric Point: 8.5315

>NTDB_id=372475 CVULP_RS05470 WP_099507826.1 1056765..1057004(-) (Cj0011c) [Campylobacter vulpis strain 251/13]
MKKIFFLMFALASFLFAAVNLNTATLEELKGLKGIGETKARAILDYRKEQNFTSIEELKKVKGIGDKTFEDLKDSVVVE

Nucleotide

• Length: 240 bp

>NTDB_id=372475 CVULP_RS05470 WP_099507826.1 1056765..1057004(-) (Cj0011c) [Campylobacter vulpis strain 251/13]
ATGAAAAAAATATTTTTCTTAATGTTTGCTTTAGCGAGTTTTTTGTTTGCGGCTGTGAATTTAAATACTGCTACGCTTGA
AGAATTAAAAGGCTTAAAAGGCATAGGAGAGACCAAGGCGAGGGCGATTTTAGATTATAGAAAAGAGCAAAATTTCACAA
GCATAGAAGAGCTTAAAAAGGTTAAGGGTATAGGGGATAAAACTTTCGAGGACTTAAAAGATTCTGTTGTTGTGGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	69.62	100	0.696
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comEA	Bacillus subtilis subsp. subtilis str. 168	55.556	79.747	0.443
comEA/celA/cilE	Streptococcus pneumoniae Rx1	56.452	78.481	0.443
comEA/celA/cilE	Streptococcus pneumoniae D39	56.452	78.481	0.443
comEA/celA/cilE	Streptococcus pneumoniae R6	56.452	78.481	0.443
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	56.452	78.481	0.443
comEA/celA/cilE	Streptococcus mitis NCTC 12261	56.452	78.481	0.443
comEA/celA/cilE	Streptococcus mitis SK321	54.839	78.481	0.43
comEA	Lactococcus lactis subsp. cremoris KW2	53.226	78.481	0.418
comEA	Legionella pneumophila strain ERS1305867	50	83.544	0.418
comEA	Legionella pneumophila str. Paris	50	83.544	0.418
comEA	Staphylococcus aureus MW2	55.357	70.886	0.392
comEA	Staphylococcus aureus N315	55.357	70.886	0.392
comEA	Latilactobacillus sakei subsp. sakei 23K	49.206	79.747	0.392
comEA/comE1	Glaesserella parasuis strain SC1401	47.619	79.747	0.38
comEA	Vibrio cholerae strain A1552	54.545	69.62	0.38
comEA	Vibrio cholerae C6706	54.545	69.62	0.38
comEA	Acinetobacter baumannii D1279779	46.032	79.747	0.367
comE1/comEA	Haemophilus influenzae Rd KW20	47.541	77.215	0.367
comEA	Acinetobacter baylyi ADP1	47.541	77.215	0.367
comEA	Vibrio parahaemolyticus RIMD 2210633	46.774	78.481	0.367