Detailed information NTG0371199

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FLM54_RS11900
• Genome accession: NZ_CP041327
• Coordinates: 2561547..2562590 (-)
• Length: 347 a.a.
• NCBI ID: WP_058155138.1
• Uniprot ID: A0A5S3VW73
• Organism: Pseudoalteromonas sp. Scap25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2556547..2567590

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FLM54_RS11890 (FLM54_11940)	-	2557973..2559142 (+)	1170	WP_178956466.1	DcaP family trimeric outer membrane transporter	-
FLM54_RS11895 (FLM54_11945)	-	2559314..2561434 (+)	2121	WP_178956467.1	TonB-dependent siderophore receptor	-
FLM54_RS11900 (FLM54_11950)	recA	2561547..2562590 (-)	1044	WP_058155138.1	recombinase RecA	Machinery gene
FLM54_RS11905 (FLM54_11955)	-	2562659..2563147 (-)	489	WP_138609349.1	CinA family protein	-
FLM54_RS11910 (FLM54_11960)	mutS	2563169..2565754 (+)	2586	WP_178956468.1	DNA mismatch repair protein MutS	-
FLM54_RS11915 (FLM54_11965)	rpoS	2565811..2566782 (-)	972	WP_109874229.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37404.93 Da
• Isoelectric Point: 4.9592

>NTDB_id=371199 FLM54_RS11900 WP_058155138.1 2561547..2562590(-) (recA) [Pseudoalteromonas sp. Scap25]
MNDNKQKALDAALSQIERQFGKGSIMKLGDNKALNIDAVSTGSLGIDIALGIGGLPMGRIVEVYGPESSGKTTLTLQVIA
QAQKEGKTCAFVDAEHALDPVYAQKLGVNIDELLVSQPDTGEQALEICDMLVRSSAVDVVIVDSVAALTPKAEIEGDMGD
SHMGLQARLMSQALRKLTGNIKRSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNE
TRVKVVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYNGNKVGQGKSNSIKFLKENPEIADEIEG
KLREMLLLKATVEPEDGEDVLGDEGDL

Nucleotide

• Length: 1044 bp

>NTDB_id=371199 FLM54_RS11900 WP_058155138.1 2561547..2562590(-) (recA) [Pseudoalteromonas sp. Scap25]
ATGAACGATAACAAACAAAAAGCGTTGGACGCAGCTTTATCACAAATTGAACGTCAATTTGGTAAAGGTTCAATCATGAA
ATTGGGTGACAATAAGGCGTTAAACATTGACGCTGTATCAACAGGCTCGCTAGGTATTGATATTGCTTTAGGCATAGGCG
GCTTGCCAATGGGGCGTATTGTTGAAGTATATGGCCCAGAGTCATCAGGTAAAACAACGCTAACATTACAAGTTATCGCA
CAAGCTCAAAAAGAAGGTAAAACGTGTGCCTTTGTTGATGCTGAGCATGCTCTTGATCCAGTTTACGCACAAAAGTTAGG
CGTTAATATTGATGAGTTACTGGTATCTCAACCAGATACGGGTGAACAAGCACTGGAAATTTGTGACATGTTAGTGCGCT
CAAGCGCGGTTGATGTAGTTATTGTCGATTCTGTTGCTGCATTAACACCTAAAGCTGAGATTGAAGGCGACATGGGTGAT
TCACACATGGGTCTACAAGCACGTTTAATGTCACAAGCATTACGTAAGCTTACAGGTAACATTAAGCGCTCAAACACGCT
ATGTATTTTCATTAACCAAATCCGTATGAAAATTGGTGTAATGTTTGGTAATCCTGAAACAACAACTGGTGGTAACGCCC
TGAAATTTTACGCCTCTGTACGTATTGATATTCGTCGTATTGGTTCAGTAAAAGAAGGTGATGAAGTTGTTGGTAATGAA
ACGCGTGTTAAAGTTGTGAAGAACAAAGTAGCACCGCCGTTCAAACAAGCTGAATTTATCATTATGTATGGTGAAGGTAT
TTCTAAGCAGGGCGAGCTAATTGATTTAGGTGTTAAGCATAAAATTGTTGAAAAAGCAGGTGCTTGGTACAGTTACAATG
GCAACAAAGTTGGCCAAGGTAAGTCTAATTCAATTAAGTTCCTTAAAGAAAACCCTGAAATTGCAGATGAAATTGAAGGT
AAGTTACGTGAAATGCTATTGCTAAAAGCAACGGTTGAGCCAGAAGATGGCGAAGACGTATTAGGTGATGAAGGCGACCT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A5S3VW73

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	79.511	94.236	0.749
recA	Vibrio cholerae O1 biovar El Tor strain E7946	79.511	94.236	0.749
recA	Pseudomonas stutzeri DSM 10701	74.419	99.135	0.738
recA	Acinetobacter baumannii D1279779	72.832	99.712	0.726
recA	Glaesserella parasuis strain SC1401	73.392	98.559	0.723
recA	Acinetobacter baylyi ADP1	75.529	95.389	0.72
recA	Neisseria gonorrhoeae MS11	71.512	99.135	0.709
recA	Neisseria gonorrhoeae MS11	71.512	99.135	0.709
recA	Neisseria gonorrhoeae strain FA1090	71.512	99.135	0.709
recA	Ralstonia pseudosolanacearum GMI1000	73.955	89.625	0.663
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.431	98.847	0.637
recA	Bacillus subtilis subsp. subtilis str. 168	68.224	92.507	0.631
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.371	96.254	0.62
recA	Helicobacter pylori 26695	64.923	93.66	0.608
recA	Helicobacter pylori strain NCTC11637	64.923	93.66	0.608
recA	Streptococcus pneumoniae R6	61.471	97.983	0.602
recA	Streptococcus pneumoniae TIGR4	61.471	97.983	0.602
recA	Streptococcus pneumoniae Rx1	61.471	97.983	0.602
recA	Streptococcus pneumoniae D39	61.471	97.983	0.602
recA	Streptococcus mitis NCTC 12261	62.848	93.084	0.585
recA	Streptococcus mutans UA159	61.468	94.236	0.579
recA	Streptococcus mitis SK321	62.229	93.084	0.579
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.696	91.931	0.576
recA	Streptococcus pyogenes NZ131	60.856	94.236	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	60.436	92.507	0.559
recA	Lactococcus lactis subsp. cremoris KW2	58.824	93.084	0.548