Detailed information NTG0036862

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SVI_RS14960
• Genome accession: NC_014012
• Coordinates: 3586610..3587668 (-)
• Length: 352 a.a.
• NCBI ID: WP_013052433.1
• Uniprot ID: -
• Organism: Shewanella violacea DSS12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3581610..3592668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SVI_RS14950 (SVI_3163)	csrA	3582444..3582641 (-)	198	WP_013052431.1	carbon storage regulator CsrA	-
SVI_RS14955 (SVI_3164)	alaS	3583237..3585861 (-)	2625	WP_013052432.1	alanine--tRNA ligase	-
SVI_RS14960 (SVI_3165)	recA	3586610..3587668 (-)	1059	WP_013052433.1	recombinase RecA	Machinery gene
SVI_RS14965 (SVI_3166)	mutS	3588018..3590585 (+)	2568	WP_013052434.1	DNA mismatch repair protein MutS	-
SVI_RS14970 (SVI_3167)	rpoS	3590974..3591945 (-)	972	WP_041419998.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37750.34 Da
• Isoelectric Point: 5.5331

>NTDB_id=36862 SVI_RS14960 WP_013052433.1 3586610..3587668(-) (recA) [Shewanella violacea DSS12]
MKIDANKEKALNAVLSQIEKQFGKGSIMKLGENRSMDVETISTGSLSLDVALGAGGLPLGRIVEIYGPESSGKTTLTLEV
IAAAQRQGRVCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQTNTMLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDRDEVIG
NETRVKVVKNKIAAPFKQAEFQILYGKGINRTGELVDLGVIHKLVEKAGAWYSYKGNKIGQGRANAGKYLTEHPEISAEI
ETTLRGMLLASPDAAESAAGDENVDLETGEVF

Nucleotide

• Length: 1059 bp

>NTDB_id=36862 SVI_RS14960 WP_013052433.1 3586610..3587668(-) (recA) [Shewanella violacea DSS12]
ATGAAGATTGATGCGAACAAAGAGAAAGCACTGAATGCCGTTTTAAGTCAGATCGAGAAACAGTTCGGTAAAGGCTCTAT
CATGAAACTGGGCGAGAACCGCTCGATGGATGTTGAGACCATCTCTACGGGATCACTTTCTTTAGATGTAGCACTGGGTG
CCGGCGGACTTCCTTTAGGACGTATCGTTGAGATTTATGGACCAGAATCTTCTGGTAAGACAACACTGACCCTAGAGGTC
ATTGCTGCTGCACAACGCCAAGGTAGAGTGTGTGCCTTTATCGATGCAGAGCATGCCTTAGACCCTATATATGCTAAAAA
GCTAGGTGTAGATATTGATAACCTACTTTGTTCTCAACCAGATACGGGTGAGCAAGCGTTAGAGATTTGTGATGCCTTGA
CTCGTTCAGGTGCTGTTGATGTCATCGTTGTCGATTCGGTTGCGGCTTTAACGCCGAAAGCTGAGATTGAAGGTGAAATT
GGTGATTCACATATGGGACTTGCTGCTCGTATGATGAGCCAGGCGATGCGTAAGCTCGCTGGTAACCTGAAGCAAACCAA
TACCATGCTTATCTTTATCAACCAGATCCGTATGAAGATTGGTGTCATGTTCGGTAACCCTGAAACCACCACAGGTGGTA
ACGCACTTAAGTTTTATGCTTCTGTTCGCCTCGATATTCGCCGTATCGGTGCAATCAAAGATCGTGACGAAGTTATCGGT
AACGAGACTCGCGTTAAAGTGGTTAAGAACAAGATCGCAGCACCATTTAAACAGGCGGAATTCCAAATTCTTTATGGCAA
AGGCATCAACCGTACGGGTGAACTCGTCGACCTTGGTGTGATACATAAATTAGTAGAGAAAGCGGGTGCTTGGTACAGCT
ATAAAGGCAATAAAATAGGCCAGGGCCGTGCAAATGCAGGTAAGTACTTAACTGAACATCCTGAAATTTCTGCTGAAATC
GAAACTACACTGCGTGGTATGTTACTCGCATCTCCCGATGCGGCTGAGTCAGCTGCAGGTGATGAGAATGTTGACCTCGA
GACTGGTGAAGTATTCTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	78.187	100	0.784
recA	Vibrio cholerae strain A1552	78.187	100	0.784
recA	Acinetobacter baylyi ADP1	72.059	96.591	0.696
recA	Pseudomonas stutzeri DSM 10701	73.252	93.466	0.685
recA	Acinetobacter baumannii D1279779	72.036	93.466	0.673
recA	Glaesserella parasuis strain SC1401	66.763	98.295	0.656
recA	Ralstonia pseudosolanacearum GMI1000	69.255	91.477	0.634
recA	Neisseria gonorrhoeae MS11	68.111	91.761	0.625
recA	Neisseria gonorrhoeae MS11	68.111	91.761	0.625
recA	Neisseria gonorrhoeae strain FA1090	68.111	91.761	0.625
recA	Streptococcus mitis SK321	61.404	97.159	0.597
recA	Streptococcus pneumoniae R6	63.11	93.182	0.588
recA	Streptococcus pneumoniae Rx1	63.11	93.182	0.588
recA	Streptococcus pneumoniae D39	63.11	93.182	0.588
recA	Streptococcus pneumoniae TIGR4	63.11	93.182	0.588
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.947	96.023	0.585
recA	Streptococcus mitis NCTC 12261	62.5	93.182	0.582
recA	Streptococcus mutans UA159	61.28	93.182	0.571
recA	Streptococcus pyogenes NZ131	61.28	93.182	0.571
recA	Helicobacter pylori strain NCTC11637	61.35	92.614	0.568
recA	Helicobacter pylori 26695	61.043	92.614	0.565
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	94.034	0.563
recA	Bacillus subtilis subsp. subtilis str. 168	61.682	91.193	0.562
recA	Latilactobacillus sakei subsp. sakei 23K	61.442	90.625	0.557
recA	Lactococcus lactis subsp. cremoris KW2	59.756	93.182	0.557
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.27	89.489	0.548