Detailed information NTG0367058

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FG342_RS06795
• Genome accession: NZ_CP040780
• Coordinates: 1338260..1339312 (+)
• Length: 350 a.a.
• NCBI ID: WP_047678675.1
• Uniprot ID: A0AAP8LX93
• Organism: Lacticaseibacillus rhamnosus strain 1.0320
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1333260..1344312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FG342_RS06775	ymfI	1334397..1335125 (+)	729	WP_005713294.1	elongation factor P 5-aminopentanone reductase	-
FG342_RS06780	-	1335212..1336147 (+)	936	WP_005688668.1	helix-turn-helix domain-containing protein	-
FG342_RS06785	pgsA	1336144..1336737 (+)	594	WP_005688184.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FG342_RS06790	cinA	1336967..1338208 (+)	1242	WP_047678678.1	competence/damage-inducible protein A	Machinery gene
FG342_RS06795	recA	1338260..1339312 (+)	1053	WP_047678675.1	recombinase RecA	Machinery gene
FG342_RS06815	rny	1340042..1341613 (+)	1572	WP_005684479.1	ribonuclease Y	-
FG342_RS06820	-	1341702..1342358 (-)	657	WP_095593725.1	YigZ family protein	-
FG342_RS06825	-	1342386..1343651 (+)	1266	WP_047675554.1	DEAD/DEAH box helicase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37586.87 Da
• Isoelectric Point: 5.5040

>NTDB_id=367058 FG342_RS06795 WP_047678675.1 1338260..1339312(+) (recA) [Lacticaseibacillus rhamnosus strain 1.0320]
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDLIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADIETDTTTSAAS

Nucleotide

• Length: 1053 bp

>NTDB_id=367058 FG342_RS06795 WP_047678675.1 1338260..1339312(+) (recA) [Lacticaseibacillus rhamnosus strain 1.0320]
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCGCGCGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGAAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCCGAAAATGCCATGGATCCCAAATATGCGGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACTGGTGAACAAGGATTGGAAATTGCCGATGAGCTGGTTG
CATCGGGCGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAGACCAAAAC
AATTGCCTTGTTCATCAACCAGATCCGGGAAAAAGTCGGCATTGTATTCGGCAATCCTGAAATTACGCCAGGTGGTCGGG
CGCTGAAATTTTATGCTACTGTGCGTATGGAAGTGCGCCGTTCCGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
TATTTCCCAAAGTGGTGAACTTGTCGACATGGCGGTTGAAAAAGACCTCATTGAAAAGGCGGGTTCGTGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAGCACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCAGACATAGAGACAGATACTACCACATC
TGCTGCATCATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	82.121	94.286	0.774
recA	Bacillus subtilis subsp. subtilis str. 168	70.482	94.857	0.669
recA	Streptococcus pneumoniae Rx1	66.667	97.714	0.651
recA	Streptococcus pneumoniae D39	66.667	97.714	0.651
recA	Streptococcus pneumoniae R6	66.667	97.714	0.651
recA	Streptococcus pneumoniae TIGR4	66.667	97.714	0.651
recA	Streptococcus pyogenes NZ131	68.902	93.714	0.646
recA	Streptococcus mitis NCTC 12261	68.389	94	0.643
recA	Streptococcus mitis SK321	68.389	94	0.643
recA	Streptococcus mutans UA159	68.389	94	0.643
recA	Lactococcus lactis subsp. cremoris KW2	66.566	94.857	0.631
recA	Ralstonia pseudosolanacearum GMI1000	62.54	90	0.563
recA	Neisseria gonorrhoeae MS11	59.574	94	0.56
recA	Neisseria gonorrhoeae strain FA1090	59.574	94	0.56
recA	Neisseria gonorrhoeae MS11	59.574	94	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.372	92.286	0.557
recA	Acinetobacter baylyi ADP1	61.129	91.143	0.557
recA	Acinetobacter baumannii D1279779	60.815	91.143	0.554
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.27	96.286	0.551
recA	Pseudomonas stutzeri DSM 10701	59.317	92	0.546
recA	Glaesserella parasuis strain SC1401	55.362	98.571	0.546
recA	Vibrio cholerae strain A1552	59.561	91.143	0.543
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.561	91.143	0.543
recA	Helicobacter pylori strain NCTC11637	55.352	93.429	0.517
recA	Helicobacter pylori 26695	55.046	93.429	0.514
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.077	92.857	0.511