Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   FG051_RS03600 Genome accession   NZ_CP040736
Coordinates   736515..737639 (+) Length   374 a.a.
NCBI ID   WP_057813992.1    Uniprot ID   A0A5B7SX26
Organism   Companilactobacillus futsaii strain Y97     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 731515..742639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FG051_RS03575 (FG051_03575) yfmH 732328..733566 (+) 1239 WP_057813983.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  FG051_RS03580 (FG051_03580) ymfI 733567..734292 (+) 726 WP_057813984.1 elongation factor P 5-aminopentanone reductase -
  FG051_RS03585 (FG051_03585) - 734358..735206 (+) 849 WP_057813986.1 helix-turn-helix domain-containing protein -
  FG051_RS03590 (FG051_03590) pgsA 735279..735863 (+) 585 WP_057813988.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FG051_RS03595 (FG051_03595) - 735908..736426 (+) 519 WP_235526917.1 CinA family protein -
  FG051_RS03600 (FG051_03600) recA 736515..737639 (+) 1125 WP_057813992.1 recombinase RecA Machinery gene
  FG051_RS03605 (FG051_03605) rny 737786..739351 (+) 1566 WP_057813994.1 ribonuclease Y -
  FG051_RS03610 (FG051_03610) - 739473..740558 (+) 1086 WP_057814146.1 glycosyltransferase family 4 protein -
  FG051_RS03615 (FG051_03615) - 740699..741457 (+) 759 WP_083484585.1 helix-turn-helix domain-containing protein -
  FG051_RS03620 (FG051_03620) - 741493..742131 (-) 639 WP_057813996.1 YigZ family protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40496.86 Da        Isoelectric Point: 5.0500

>NTDB_id=366858 FG051_RS03600 WP_057813992.1 736515..737639(+) (recA) [Companilactobacillus futsaii strain Y97]
MAKDERQKALDVALKKIEKDFGKGAIMRMGDDLNTQISTVSSGSLALDNALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPAYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDIVVVDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIMFGNPETTPGGRALKFYSTIRLEVRRAEQIKDGSDVIGN
RTKIKVVKNKVAPPFKIALVDIMYGHGISQTGELVDMAVDKDIIDKSGSWYSYGEERIGQGRENAKTYLADNPDKMEEIK
QKVRKAYGMDGKSEDEEKSDDTKDVKSTKKDEKSTKKDDEALDLNLEADKKENK

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=366858 FG051_RS03600 WP_057813992.1 736515..737639(+) (recA) [Companilactobacillus futsaii strain Y97]
TTGGCTAAAGATGAACGACAAAAGGCTTTAGATGTAGCCTTAAAGAAAATTGAAAAGGATTTTGGTAAGGGTGCCATTAT
GAGAATGGGTGATGACTTGAATACTCAGATCTCAACTGTTTCTAGTGGTTCACTTGCACTTGATAATGCATTAGGTGTCG
GTGGTTTTCCACGAGGAAGAATCGTAGAAATATATGGACCTGAAAGTTCTGGTAAAACAACCGTTGCTTTACATGCCGTT
GCTGAAGTTCAAAAGCAAGGTGGTACTGCAGCATATATCGATGCTGAAAATGCCATGGATCCCGCTTATGCAACTGCTTT
GGGTGTTAATATCGATGACTTATTGTTATCACAACCTGATACAGGTGAACAAGGATTAGAGATTGCTGATGCTTTGGTAT
CTAGTGGTGCAGTCGATATCGTCGTTGTCGATTCTGTTGCTGCTTTAGTTCCACGTGCAGAAATTGAAGGTGAAATGGGA
GATTCCCACGTTGGTCTTCAAGCACGTTTAATGTCACAAGCCTTGCGTAAACTATCTGGTTCAATCAACAAGACTAAGAC
GATTGCTTTGTTTATTAATCAAATTCGTGAAAAAGTCGGAATCATGTTTGGTAATCCAGAAACTACTCCTGGTGGCCGTG
CCTTGAAATTTTATTCAACAATCAGACTAGAAGTGCGCCGTGCTGAACAGATCAAAGATGGTTCTGATGTAATTGGTAAT
CGTACTAAAATAAAAGTTGTTAAGAACAAGGTTGCCCCACCATTTAAGATTGCCTTGGTAGATATTATGTATGGTCATGG
TATCTCTCAAACTGGTGAATTAGTCGATATGGCGGTCGACAAAGATATTATTGATAAGAGTGGTTCATGGTACTCTTATG
GTGAAGAACGAATTGGTCAGGGTCGTGAAAATGCTAAGACCTACCTAGCTGATAATCCTGACAAAATGGAAGAAATTAAG
CAAAAGGTTCGTAAAGCTTATGGCATGGATGGCAAATCAGAAGATGAAGAAAAGTCTGATGATACTAAAGATGTCAAAAG
TACAAAAAAAGATGAAAAATCAACTAAAAAAGATGACGAAGCGCTAGATTTAAATCTTGAAGCTGATAAAAAAGAAAATA
AATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(8-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B7SX26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Latilactobacillus sakei subsp. sakei 23K

85.088

91.444

0.778
  recA Streptococcus mutans UA159

68.108

98.93

0.674
  recA Bacillus subtilis subsp. subtilis str. 168

76.074

87.166

0.663
  recA Streptococcus mitis SK321

69.034

94.118

0.65
  recA Streptococcus mitis NCTC 12261

69.034

94.118

0.65
  recA Streptococcus pneumoniae R6

68.555

94.385

0.647
  recA Streptococcus pneumoniae Rx1

68.555

94.385

0.647
  recA Streptococcus pneumoniae D39

68.555

94.385

0.647
  recA Streptococcus pneumoniae TIGR4

68.555

94.385

0.647
  recA Streptococcus pyogenes NZ131

72.644

87.968

0.639
  recA Lactococcus lactis subsp. cremoris KW2

69.76

89.305

0.623
  recA Neisseria gonorrhoeae MS11

63.11

87.701

0.553
  recA Neisseria gonorrhoeae MS11

63.11

87.701

0.553
  recA Neisseria gonorrhoeae strain FA1090

63.11

87.701

0.553
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.89

87.701

0.543
  recA Acinetobacter baumannii D1279779

59.064

91.444

0.54
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.229

86.364

0.537
  recA Ralstonia pseudosolanacearum GMI1000

63.898

83.69

0.535
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.58

90.374

0.529
  recA Acinetobacter baylyi ADP1

61.18

86.096

0.527
  recA Glaesserella parasuis strain SC1401

57.478

91.176

0.524
  recA Vibrio cholerae strain A1552

60.559

86.096

0.521
  recA Vibrio cholerae O1 biovar El Tor strain E7946

60.559

86.096

0.521
  recA Pseudomonas stutzeri DSM 10701

60.125

85.829

0.516
  recA Helicobacter pylori strain NCTC11637

58.182

88.235

0.513
  recA Helicobacter pylori 26695

58.182

88.235

0.513

Multiple sequence alignment