Detailed information NTG0366556

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FGE20_RS03275
• Genome accession: NZ_CP040694
• Coordinates: 743640..744647 (-)
• Length: 335 a.a.
• NCBI ID: WP_138981713.1
• Uniprot ID: A0A5B7UF01
• Organism: Elizabethkingia sp. JS20170427COW
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 738640..749647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGE20_RS03260 (FGE20_03260)	-	739895..740476 (+)	582	WP_138981710.1	ACP phosphodiesterase	-
FGE20_RS03265 (FGE20_03265)	-	740489..741478 (-)	990	WP_138981711.1	hypothetical protein	-
FGE20_RS03270 (FGE20_03270)	htpG	741642..743531 (-)	1890	WP_138981712.1	molecular chaperone HtpG	-
FGE20_RS03275 (FGE20_03275)	recA	743640..744647 (-)	1008	WP_138981713.1	recombinase RecA	Machinery gene
FGE20_RS03285 (FGE20_03285)	-	745067..745681 (-)	615	WP_138981714.1	hypothetical protein	-
FGE20_RS03290 (FGE20_03290)	-	745851..746576 (+)	726	WP_138981715.1	hypothetical protein	-
FGE20_RS03295 (FGE20_03295)	ligA	746663..748678 (+)	2016	WP_138981716.1	NAD-dependent DNA ligase LigA	-
FGE20_RS03300 (FGE20_03300)	-	748752..749228 (-)	477	WP_138981717.1	BON domain-containing protein	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36186.49 Da
• Isoelectric Point: 5.3305

>NTDB_id=366556 FGE20_RS03275 WP_138981713.1 743640..744647(-) (recA) [Elizabethkingia sp. JS20170427COW]
MSNIEDKKKALALVLEKLDKTYGKGTVMTMGDEGIDHSIEVIPSGSLGLDLALGIGGYPKGRIIEIYGPESSGKTTLTLH
AIAEAQKQGGIAAFIDAEHAFDRTYAAKLGINLEDLIISQPDNGEQALEIADNLIRSGAIDIVVVDSVAALTPKAEIEGE
MGDSKMGLHARLMSQALRKLTATINKTKCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRIDIRKASAPIKNGDEA
IGSRVKVKIVKNKVAPPFKQAEFDIMYGEGVSKVGEILDTAVDMNIIKKSGSWFSYGDTKLGQGRDAVKEVIKDNPELQE
ELEEKIKEEISNQHS

Nucleotide

• Length: 1008 bp

>NTDB_id=366556 FGE20_RS03275 WP_138981713.1 743640..744647(-) (recA) [Elizabethkingia sp. JS20170427COW]
ATGAGTAATATAGAAGATAAAAAGAAAGCACTAGCCCTTGTGTTAGAAAAGCTAGATAAGACCTATGGTAAAGGTACAGT
AATGACGATGGGAGACGAAGGTATCGACCATTCTATAGAGGTAATTCCTTCCGGATCTCTTGGTTTAGATTTAGCATTAG
GTATTGGTGGTTATCCTAAAGGGAGAATTATTGAAATCTATGGACCTGAATCTTCAGGGAAAACAACTTTAACACTTCAC
GCTATTGCAGAAGCTCAGAAGCAAGGTGGTATAGCTGCTTTTATTGATGCTGAACATGCCTTTGATAGAACTTATGCGGC
AAAATTGGGTATTAATTTAGAAGATCTTATCATTTCTCAGCCAGATAACGGTGAACAAGCTTTGGAAATTGCAGATAACC
TTATCCGCTCAGGAGCTATTGATATTGTAGTAGTAGACTCGGTTGCGGCACTTACTCCAAAAGCAGAAATTGAGGGAGAA
ATGGGAGATTCTAAAATGGGACTTCATGCAAGATTAATGTCTCAAGCATTAAGAAAATTAACCGCTACCATTAATAAAAC
CAAATGTACCGTGATTTTCATTAACCAATTAAGAGAGAAAATTGGAGTAATGTTTGGTAATCCAGAAACAACTACGGGTG
GTAATGCACTTAAATTTTACGCTTCTGTAAGAATTGATATTAGAAAAGCATCTGCACCTATTAAAAACGGTGACGAAGCT
ATTGGTAGCCGTGTGAAAGTGAAAATTGTGAAAAACAAAGTTGCTCCACCTTTCAAACAAGCAGAATTTGATATCATGTA
TGGAGAAGGGGTTTCTAAGGTAGGTGAAATCTTAGATACTGCCGTAGATATGAATATCATTAAGAAAAGCGGTTCTTGGT
TTAGCTATGGAGATACTAAACTAGGACAAGGTAGAGATGCAGTGAAGGAAGTTATCAAAGATAATCCAGAACTTCAAGAA
GAATTAGAAGAAAAAATTAAAGAAGAAATTAGCAACCAACACAGCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-272)

3D structure

• AlphaFold DB: A0A5B7UF01

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	82.727	98.507	0.815
recA	Glaesserella parasuis strain SC1401	64.565	99.403	0.642
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.526	97.612	0.63
recA	Ralstonia pseudosolanacearum GMI1000	61.721	100	0.621
recA	Helicobacter pylori strain NCTC11637	62.918	98.209	0.618
recA	Helicobacter pylori 26695	62.918	98.209	0.618
recA	Acinetobacter baylyi ADP1	61.934	98.806	0.612
recA	Bacillus subtilis subsp. subtilis str. 168	63.077	97.015	0.612
recA	Acinetobacter baumannii D1279779	62.883	97.313	0.612
recA	Neisseria gonorrhoeae MS11	63.467	96.418	0.612
recA	Neisseria gonorrhoeae MS11	63.467	96.418	0.612
recA	Neisseria gonorrhoeae strain FA1090	63.467	96.418	0.612
recA	Pseudomonas stutzeri DSM 10701	61.702	98.209	0.606
recA	Streptococcus pneumoniae R6	59.238	100	0.603
recA	Streptococcus pneumoniae D39	59.238	100	0.603
recA	Streptococcus pneumoniae Rx1	59.238	100	0.603
recA	Streptococcus pneumoniae TIGR4	59.238	100	0.603
recA	Streptococcus mitis SK321	61.538	97.015	0.597
recA	Streptococcus mitis NCTC 12261	61.538	97.015	0.597
recA	Streptococcus pyogenes NZ131	61.043	97.313	0.594
recA	Latilactobacillus sakei subsp. sakei 23K	61.3	96.418	0.591
recA	Lactococcus lactis subsp. cremoris KW2	60.123	97.313	0.585
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.271	98.209	0.582
recA	Vibrio cholerae strain A1552	59.271	98.209	0.582
recA	Streptococcus mutans UA159	59.816	97.313	0.582
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.447	98.209	0.564