Detailed information NTG0365198

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FFU37_RS11440
• Genome accession: NZ_CP040558
• Coordinates: 2576915..2577958 (-)
• Length: 347 a.a.
• NCBI ID: WP_002958952.1
• Uniprot ID: A0A7W2TQI2
• Organism: Pseudoalteromonas distincta strain 16-SW-7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2571915..2582958

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FFU37_RS11430 (FFU37_11430)	-	2573117..2574283 (+)	1167	WP_024600614.1	DcaP family trimeric outer membrane transporter	-
FFU37_RS11435 (FFU37_11435)	-	2574551..2576659 (+)	2109	WP_138489534.1	TonB-dependent siderophore receptor	-
FFU37_RS11440 (FFU37_11440)	recA	2576915..2577958 (-)	1044	WP_002958952.1	recombinase RecA	Machinery gene
FFU37_RS11445 (FFU37_11445)	-	2578026..2578514 (-)	489	WP_039486736.1	CinA family protein	-
FFU37_RS11450 (FFU37_11450)	mutS	2578536..2581121 (+)	2586	WP_138489535.1	DNA mismatch repair protein MutS	-
FFU37_RS11455 (FFU37_11455)	rpoS	2581213..2582187 (-)	975	WP_138489536.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37540.10 Da
• Isoelectric Point: 4.9666

>NTDB_id=365198 FFU37_RS11440 WP_002958952.1 2576915..2577958(-) (recA) [Pseudoalteromonas distincta strain 16-SW-7]
MNDNKQKALDAALSQIERQFGKGSIMKLGDNKALNIESVSTGSLGIDIALGIGGLPMGRIVEVYGPESSGKTTLTLQVIA
EAQKEGKTCAFIDAEHALDPVYAQKLGVNIDDLFVSQPDTGEQALEICDMLVRSSAVDVVIIDSVAALTPKAEIEGDMGD
SHMGLQARLMSQALRKLTGNIKRSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNE
TRVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYSGNKVGQGKSNSIKFLKENPEIADEIEG
KLREMLLLKATIEPEDGEDKLGDDPDL

Nucleotide

• Length: 1044 bp

>NTDB_id=365198 FFU37_RS11440 WP_002958952.1 2576915..2577958(-) (recA) [Pseudoalteromonas distincta strain 16-SW-7]
ATGAACGATAACAAACAAAAAGCGTTAGACGCAGCACTATCACAAATTGAACGTCAATTTGGTAAAGGCTCAATTATGAA
ATTGGGTGACAACAAAGCGTTAAACATTGAATCTGTATCTACAGGTTCACTAGGTATTGATATTGCCTTAGGCATAGGTG
GCTTACCTATGGGACGTATTGTTGAAGTGTATGGTCCTGAGTCATCTGGTAAAACAACGCTTACTTTACAAGTTATCGCA
GAAGCTCAAAAAGAAGGTAAAACATGTGCCTTTATTGATGCTGAGCATGCTCTAGATCCTGTATATGCACAAAAACTAGG
TGTAAATATTGATGACCTTTTTGTATCTCAACCTGATACAGGTGAGCAAGCACTAGAAATTTGTGACATGTTAGTACGTT
CAAGCGCGGTAGACGTTGTTATTATTGACTCGGTTGCTGCACTTACACCAAAAGCTGAGATTGAAGGCGACATGGGCGAC
TCGCACATGGGCTTACAAGCACGTTTAATGTCACAGGCATTACGTAAGCTTACTGGTAATATTAAACGCTCTAACACGTT
ATGTATTTTCATTAACCAAATCCGTATGAAAATTGGTGTTATGTTTGGTAACCCAGAAACAACAACGGGTGGTAATGCAC
TTAAGTTTTACGCATCGGTACGTATTGATATTCGTCGTATTGGTTCTGTGAAAGAAGGTGATGAAGTTGTTGGTAACGAA
ACCCGCGTTAAAATTGTTAAAAACAAAGTAGCGCCGCCATTTAAACAAGCTGAATTTATCATCATGTATGGCGAAGGTAT
TTCTAAGCAAGGCGAGTTAATTGATTTAGGTGTTAAGCATAAAATTGTTGAAAAAGCAGGTGCTTGGTACAGTTACAGTG
GCAACAAGGTTGGCCAAGGTAAATCTAACTCAATTAAGTTTTTGAAAGAAAACCCAGAAATTGCAGATGAGATTGAAGGT
AAGTTACGCGAAATGCTTTTACTAAAAGCAACTATTGAACCTGAAGACGGTGAAGATAAGTTAGGCGACGATCCAGACCT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A7W2TQI2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	78.593	94.236	0.741
recA	Vibrio cholerae strain A1552	78.593	94.236	0.741
recA	Pseudomonas stutzeri DSM 10701	73.837	99.135	0.732
recA	Acinetobacter baylyi ADP1	72.334	100	0.723
recA	Acinetobacter baumannii D1279779	72.046	100	0.72
recA	Glaesserella parasuis strain SC1401	72.807	98.559	0.718
recA	Neisseria gonorrhoeae MS11	70.058	99.135	0.695
recA	Neisseria gonorrhoeae MS11	70.058	99.135	0.695
recA	Neisseria gonorrhoeae strain FA1090	70.058	99.135	0.695
recA	Ralstonia pseudosolanacearum GMI1000	74.277	89.625	0.666
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.015	98.847	0.643
recA	Bacillus subtilis subsp. subtilis str. 168	67.601	92.507	0.625
recA	Helicobacter pylori 26695	62.139	99.712	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.371	96.254	0.62
recA	Helicobacter pylori strain NCTC11637	61.561	99.712	0.614
recA	Streptococcus mutans UA159	58.43	99.135	0.579
recA	Streptococcus pneumoniae TIGR4	61.92	93.084	0.576
recA	Streptococcus pneumoniae Rx1	61.92	93.084	0.576
recA	Streptococcus pneumoniae D39	61.92	93.084	0.576
recA	Streptococcus pneumoniae R6	61.92	93.084	0.576
recA	Streptococcus mitis NCTC 12261	61.61	93.084	0.573
recA	Streptococcus mitis SK321	60.991	93.084	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.755	91.931	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	60.436	92.507	0.559
recA	Streptococcus pyogenes NZ131	59.327	94.236	0.559
recA	Lactococcus lactis subsp. cremoris KW2	58.204	93.084	0.542