Detailed information NTG0364575

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FDY98_RS03550
• Genome accession: NZ_CP040451
• Coordinates: 762982..764055 (+)
• Length: 357 a.a.
• NCBI ID: WP_027957359.1
• Uniprot ID: A0A0D6ECW2
• Organism: Halomonas sp. PA16-9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 757982..769055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDY98_RS03535 (FDY98_03555)	fdxA	759057..759378 (-)	322	Protein_729	ferredoxin FdxA	-
FDY98_RS03540 (FDY98_03560)	mutS	759669..762229 (-)	2561	Protein_730	DNA mismatch repair protein MutS	-
FDY98_RS03545 (FDY98_03565)	-	762313..762852 (+)	540	WP_035538996.1	CinA family protein	-
FDY98_RS03550 (FDY98_03570)	recA	762982..764055 (+)	1074	WP_027957359.1	recombinase RecA	Machinery gene
FDY98_RS03555 (FDY98_03575)	-	764080..764543 (+)	464	Protein_733	regulatory protein RecX	-
FDY98_RS03560 (FDY98_03580)	alaS	764758..767366 (+)	2609	Protein_734	alanine--tRNA ligase	-
FDY98_RS03565 (FDY98_03585)	-	767466..768716 (+)	1251	WP_009286781.1	aspartate kinase	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38304.83 Da
• Isoelectric Point: 5.0388

>NTDB_id=364575 FDY98_RS03550 WP_027957359.1 762982..764055(+) (recA) [Halomonas sp. PA16-9]
MAQDDNRTKALNAALTQIDRQFGKGTVMRLGDAPRVVMPSVSTGSLGLDIALGIGGLPFGRVAEIFGPESSGKTTLTLSV
IAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLISQPDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEM
GDSHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGSVKVGDEVTG
NETRVKVVKNKVAPPFRQAEFQILYGKGIYHAGEVIDLGVQCNLVDKAGAWYSYKGKKIGQGKANSALYLEEHPEIMLEI
ETQIREQLLAKPDPKKEKEDAPAEAAAELDAGDDDLL

Nucleotide

• Length: 1074 bp

>NTDB_id=364575 FDY98_RS03550 WP_027957359.1 762982..764055(+) (recA) [Halomonas sp. PA16-9]
ATGGCTCAGGATGACAACCGCACTAAAGCGCTAAACGCTGCACTCACCCAAATCGACCGTCAGTTCGGCAAGGGCACCGT
CATGCGTCTAGGCGACGCACCGCGTGTCGTCATGCCGTCGGTTTCCACCGGTTCATTGGGTCTGGATATCGCCCTCGGCA
TCGGCGGGCTGCCGTTTGGCCGCGTGGCTGAAATTTTTGGTCCAGAGTCCTCGGGTAAAACGACACTGACCCTTTCGGTG
ATTGCGCAAGCGCAAAAGCAAGGCAAAGTGTGTGCCTTCGTCGATGCCGAGCATGCGCTTGACCCCAGCTACGCAGAAAA
GCTAGGCGTCAACCTGGATGATCTACTGATTTCCCAGCCGGACACCGGTGAGCAGGCGCTGGAAATTACCGACATGCTGG
TACGCTCTGGCGGTGTTGACGTGATTGTTATCGACTCGGTCGCTGCGTTGACCCCGCGCGCTGAAATCGAAGGCGAAATG
GGTGATTCCCACGTTGGCCTACAGGCGCGTTTGATGTCTCAGGCACTGCGTAAAATCACCGGTAATATCAAAAACGCCAA
CTGCTTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTTGGTAGCCCCGAAACCACCACTGGTGGTA
ACGCGCTGAAGTTCTATGCCAGCGTGCGTCTGGATATTCGTCGTACCGGCTCGGTGAAAGTGGGTGATGAAGTCACCGGT
AACGAAACCCGCGTGAAAGTAGTCAAAAACAAGGTAGCACCGCCATTCCGTCAGGCTGAATTCCAGATTCTTTACGGCAA
GGGTATCTACCACGCCGGTGAGGTCATCGACCTGGGCGTGCAGTGCAACCTAGTCGACAAAGCCGGTGCCTGGTACAGCT
ATAAAGGTAAGAAAATCGGTCAAGGTAAAGCCAATTCAGCGCTGTATCTGGAAGAGCACCCGGAAATTATGCTCGAAATC
GAAACGCAGATTCGTGAGCAGCTCTTGGCCAAGCCCGATCCTAAAAAGGAGAAGGAAGATGCACCTGCCGAAGCAGCGGC
AGAATTGGATGCGGGTGATGACGATCTGCTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

3D structure

• AlphaFold DB: A0A0D6ECW2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	82.515	91.317	0.753
recA	Acinetobacter baylyi ADP1	73.607	95.518	0.703
recA	Acinetobacter baumannii D1279779	74.54	91.317	0.681
recA	Vibrio cholerae strain A1552	71.472	91.317	0.653
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.472	91.317	0.653
recA	Glaesserella parasuis strain SC1401	69.605	92.157	0.641
recA	Neisseria gonorrhoeae MS11	71.118	90.196	0.641
recA	Neisseria gonorrhoeae MS11	71.118	90.196	0.641
recA	Neisseria gonorrhoeae strain FA1090	71.118	90.196	0.641
recA	Ralstonia pseudosolanacearum GMI1000	72.381	88.235	0.639
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.031	91.317	0.594
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.128	94.398	0.577
recA	Helicobacter pylori 26695	62.614	92.157	0.577
recA	Helicobacter pylori strain NCTC11637	62.006	92.157	0.571
recA	Streptococcus pneumoniae R6	55.647	100	0.566
recA	Streptococcus pneumoniae TIGR4	55.647	100	0.566
recA	Streptococcus pneumoniae Rx1	55.647	100	0.566
recA	Streptococcus pneumoniae D39	55.647	100	0.566
recA	Bacillus subtilis subsp. subtilis str. 168	62.112	90.196	0.56
recA	Streptococcus mitis NCTC 12261	59.202	91.317	0.541
recA	Streptococcus mitis SK321	58.896	91.317	0.538
recA	Streptococcus mutans UA159	56.14	95.798	0.538
recA	Streptococcus pyogenes NZ131	58.769	91.036	0.535
recA	Latilactobacillus sakei subsp. sakei 23K	58.154	91.036	0.529
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.846	91.036	0.527
recA	Lactococcus lactis subsp. cremoris KW2	57.231	91.036	0.521