Detailed information NTG0362776

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FD428_RS04900
• Genome accession: NZ_CP040234
• Coordinates: 1013233..1014297 (+)
• Length: 354 a.a.
• NCBI ID: WP_012134806.1
• Uniprot ID: A8ANQ3
• Organism: Citrobacter sp. TBCP-5362
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1008233..1019297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FD428_RS04875 (FD428_04880)	mltB	1008700..1009800 (+)	1101	WP_104868275.1	lytic murein transglycosylase B	-
FD428_RS04880 (FD428_04885)	-	1010106..1010759 (+)	654	WP_071257943.1	metal ABC transporter ATP-binding protein	-
FD428_RS04885 (FD428_04890)	-	1010756..1011616 (+)	861	WP_114848658.1	metal ABC transporter permease	-
FD428_RS04890 (FD428_04895)	-	1011631..1012509 (+)	879	WP_024130887.1	metal ABC transporter substrate-binding protein	-
FD428_RS04895 (FD428_04900)	pncC	1012639..1013136 (+)	498	WP_024130886.1	nicotinamide-nucleotide amidase	-
FD428_RS04900 (FD428_04905)	recA	1013233..1014297 (+)	1065	WP_012134806.1	recombinase RecA	Machinery gene
FD428_RS04905 (FD428_04910)	recX	1014404..1014904 (+)	501	WP_047461718.1	recombination regulator RecX	-
FD428_RS04910 (FD428_04915)	alaS	1015036..1017663 (+)	2628	WP_047461723.1	alanine--tRNA ligase	-
FD428_RS04915 (FD428_04920)	csrA	1017903..1018088 (+)	186	WP_000906486.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38088.47 Da
• Isoelectric Point: 4.8171

>NTDB_id=362776 FD428_RS04900 WP_012134806.1 1013233..1014297(+) (recA) [Citrobacter sp. TBCP-5362]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKANATAWLKENPATAKEI
EKKVRELLLSNQDSTPDFSVDDNGEGVKETNEDF

Nucleotide

• Length: 1065 bp

>NTDB_id=362776 FD428_RS04900 WP_012134806.1 1013233..1014297(+) (recA) [Citrobacter sp. TBCP-5362]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCGCTGGGCCAGATCGAAAAACAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCCACCGGTTCGCTTTCTCTGGATATCGCGCTGGGCG
CGGGTGGCCTGCCGATGGGGCGTATCGTAGAAATCTACGGGCCGGAATCCTCCGGTAAAACCACCCTGACGCTTCAGGTG
ATTGCCGCTGCACAGCGTGAAGGCAAAACCTGTGCGTTTATCGACGCCGAACATGCGCTGGACCCTATCTATGCCCGCAA
ACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGG
CGCGTTCAGGCGCTGTAGACGTTATCGTTGTTGACTCCGTGGCGGCGTTGACGCCGAAAGCGGAAATCGAAGGTGAAATC
GGCGACTCTCATATGGGCCTCGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCCGGTAACCTGAAACAGTCCAA
CACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGCGTTATGTTCGGCAACCCGGAAACCACTACCGGGGGTA
ACGCGCTGAAATTCTACGCGTCCGTTCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTCGTGGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCCGCGCCGTTTAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGCATCAACTTCTATGGCGAACTGGTTGACCTGGGCGTGAAAGAGAAGCTGATCGAGAAAGCCGGTGCATGGTACAGCT
ATAACGGCGAGAAAATCGGTCAGGGTAAAGCGAATGCCACTGCCTGGCTGAAAGAGAACCCGGCGACCGCCAAAGAGATC
GAGAAAAAAGTGCGTGAGCTGCTGCTGAGCAACCAGGACTCGACGCCAGACTTCTCCGTTGATGACAACGGTGAAGGTGT
GAAAGAAACCAACGAAGATTTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A8ANQ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	84.29	93.503	0.788
recA	Vibrio cholerae O1 biovar El Tor strain E7946	84.29	93.503	0.788
recA	Pseudomonas stutzeri DSM 10701	73.887	95.198	0.703
recA	Acinetobacter baumannii D1279779	74.39	92.655	0.689
recA	Acinetobacter baylyi ADP1	74.085	92.655	0.686
recA	Glaesserella parasuis strain SC1401	69.501	96.328	0.669
recA	Neisseria gonorrhoeae MS11	69.325	92.09	0.638
recA	Neisseria gonorrhoeae MS11	69.325	92.09	0.638
recA	Neisseria gonorrhoeae strain FA1090	69.325	92.09	0.638
recA	Ralstonia pseudosolanacearum GMI1000	71.061	87.853	0.624
recA	Helicobacter pylori strain NCTC11637	62.315	95.198	0.593
recA	Helicobacter pylori 26695	62.018	95.198	0.59
recA	Streptococcus pneumoniae TIGR4	63.158	91.243	0.576
recA	Streptococcus pneumoniae Rx1	63.158	91.243	0.576
recA	Streptococcus pneumoniae D39	63.158	91.243	0.576
recA	Streptococcus pneumoniae R6	63.158	91.243	0.576
recA	Bacillus subtilis subsp. subtilis str. 168	60.177	95.763	0.576
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.346	91.525	0.571
recA	Streptococcus mitis NCTC 12261	62.539	91.243	0.571
recA	Streptococcus mitis SK321	62.539	91.243	0.571
recA	Streptococcus pyogenes NZ131	62.154	91.808	0.571
recA	Lactococcus lactis subsp. cremoris KW2	62.229	91.243	0.568
recA	Streptococcus mutans UA159	61.846	91.808	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.06	94.068	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	61.231	91.808	0.562
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	90.678	0.554