Detailed information NTG0361017

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FCN25_RS15720
• Genome accession: NZ_CP039928
• Coordinates: 3522232..3523293 (+)
• Length: 353 a.a.
• NCBI ID: WP_137226371.1
• Uniprot ID: -
• Organism: Shewanella sp. MEBiC00475
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3517232..3528293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FCN25_RS15710	rpoS	3517922..3518893 (+)	972	WP_137226369.1	RNA polymerase sigma factor RpoS	-
FCN25_RS15715	mutS	3519366..3521948 (-)	2583	WP_137226370.1	DNA mismatch repair protein MutS	-
FCN25_RS15720	recA	3522232..3523293 (+)	1062	WP_137226371.1	recombinase RecA	Machinery gene
FCN25_RS15725	alaS	3523894..3526518 (+)	2625	WP_137226372.1	alanine--tRNA ligase	-
FCN25_RS15730	csrA	3526960..3527157 (+)	198	WP_076496509.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37543.04 Da
• Isoelectric Point: 5.0312

>NTDB_id=361017 FCN25_RS15720 WP_137226371.1 3522232..3523293(+) (recA) [Shewanella sp. MEBiC00475]
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRTMDVETISTGSLSLDVALGAGGLPLGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKNGDEVIG
NETRVKVVKNKIAAPFKQAEFQILYGLGINRTGELVDLGVAHKLVDKAGAWYSYKGEKIGQGRANAGKFLTENPAIANEI
DTTLRSMLLAAPGSLGSSTDSDENVDLETGEVF

Nucleotide

• Length: 1062 bp

>NTDB_id=361017 FCN25_RS15720 WP_137226371.1 3522232..3523293(+) (recA) [Shewanella sp. MEBiC00475]
ATGAAGGTTGATCCAAATAAAGAGAAAGCACTTGCCGCCGTGTTAAGTCAAATTGAAAAACAATTTGGTAAAGGCTCAAT
TATGAAATTGGGCGAAGATCGCACAATGGACGTTGAAACTATCTCTACAGGTTCACTTTCATTGGACGTCGCCCTAGGTG
CTGGTGGTTTACCATTAGGACGTATTGTTGAGATCTATGGCCCTGAATCATCAGGTAAAACGACTTTAACACTTGAAGTG
ATTGCCGCAGCACAACGCGAAGGTAAAACCTGTGCGTTTATTGATGCAGAGCATGCACTTGACCCTATTTATGCAAAAAA
GCTAGGCGTAGATATTGATAACCTACTTTGTTCGCAGCCAGACACTGGCGAGCAAGCATTAGAAATTTGTGATGCATTAA
CCCGTTCTGGTGCTGTAGACGTTATTGTTGTCGATTCTGTTGCTGCATTAACGCCAAAAGCCGAAATTGAAGGTGAAATT
GGTGATTCACATATGGGCCTTGCTGCTCGTATGATGAGCCAAGCAATGCGCAAACTTGCTGGTAACCTTAAGCAATCAAA
TACTTTGCTTATTTTTATTAACCAAATTCGTATGAAAATTGGTGTGATGTTTGGTAGCCCAGAAACAACTACGGGTGGTA
ACGCACTGAAGTTTTACGCTTCTGTTCGTTTAGATATTCGTCGTATTGGTGCCATTAAAAACGGCGATGAAGTTATCGGT
AACGAAACCCGCGTAAAAGTCGTTAAAAACAAAATTGCAGCACCATTTAAGCAAGCTGAATTCCAAATTCTTTATGGATT
AGGTATTAATCGTACTGGCGAGTTGGTTGATTTAGGCGTTGCACATAAGCTTGTTGATAAAGCAGGTGCTTGGTATAGCT
ACAAAGGTGAAAAAATTGGTCAAGGCCGTGCAAATGCAGGTAAGTTCCTTACAGAAAATCCAGCTATTGCCAATGAAATC
GACACCACTTTACGTTCTATGCTACTAGCTGCTCCTGGCTCATTAGGCTCAAGTACTGACAGCGACGAGAATGTTGATCT
CGAAACTGGCGAAGTTTTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	82.875	92.635	0.768
recA	Vibrio cholerae O1 biovar El Tor strain E7946	82.875	92.635	0.768
recA	Acinetobacter baylyi ADP1	70.231	98.017	0.688
recA	Pseudomonas stutzeri DSM 10701	74.006	92.635	0.686
recA	Acinetobacter baumannii D1279779	69.565	97.734	0.68
recA	Glaesserella parasuis strain SC1401	68.605	97.45	0.669
recA	Ralstonia pseudosolanacearum GMI1000	69.939	92.351	0.646
recA	Neisseria gonorrhoeae MS11	68.731	91.501	0.629
recA	Neisseria gonorrhoeae MS11	68.731	91.501	0.629
recA	Neisseria gonorrhoeae strain FA1090	68.731	91.501	0.629
recA	Streptococcus pneumoniae R6	59.885	98.867	0.592
recA	Streptococcus pneumoniae Rx1	59.885	98.867	0.592
recA	Streptococcus pneumoniae D39	59.885	98.867	0.592
recA	Streptococcus pneumoniae TIGR4	59.885	98.867	0.592
recA	Streptococcus mitis SK321	59.538	98.017	0.584
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.896	94.901	0.578
recA	Streptococcus mitis NCTC 12261	62.195	92.918	0.578
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.385	92.635	0.578
recA	Helicobacter pylori strain NCTC11637	61.963	92.351	0.572
recA	Streptococcus mutans UA159	61.585	92.918	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	62.813	90.652	0.569
recA	Helicobacter pylori 26695	61.656	92.351	0.569
recA	Streptococcus pyogenes NZ131	60.976	92.918	0.567
recA	Lactococcus lactis subsp. cremoris KW2	59.878	93.201	0.558
recA	Latilactobacillus sakei subsp. sakei 23K	60.938	90.652	0.552
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.509	92.351	0.55