Detailed information NTG0360581

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FAZ25_RS05500
• Genome accession: NZ_CP039736
• Coordinates: 1060593..1061738 (+)
• Length: 381 a.a.
• NCBI ID: WP_048801498.1
• Uniprot ID: A0A7L8UYU1
• Organism: Leuconostoc sp. LN180020
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1060593..1069624	1060593..1061738	within	0

Gene organization within MGE regions

Location: 1060593..1069624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAZ25_RS05500 (FAZ25_05495)	recA	1060593..1061738 (+)	1146	WP_048801498.1	recombinase RecA	Machinery gene
FAZ25_RS05505 (FAZ25_05500)	-	1061850..1062539 (+)	690	WP_048801499.1	response regulator transcription factor	-
FAZ25_RS05510 (FAZ25_05505)	-	1062723..1063634 (+)	912	WP_004901961.1	phosphate ABC transporter substrate-binding protein	-
FAZ25_RS05515 (FAZ25_05510)	-	1063748..1065061 (+)	1314	WP_080984258.1	cell wall metabolism sensor histidine kinase WalK	-
FAZ25_RS05520 (FAZ25_05515)	-	1065159..1066040 (+)	882	WP_085698682.1	phosphate ABC transporter substrate-binding protein PstS family protein	-
FAZ25_RS05525 (FAZ25_05520)	pstC	1066130..1067053 (+)	924	WP_004901956.1	phosphate ABC transporter permease subunit PstC	-
FAZ25_RS05530 (FAZ25_05525)	pstA	1067053..1067937 (+)	885	WP_004901954.1	phosphate ABC transporter permease PstA	-
FAZ25_RS05535 (FAZ25_05530)	pstB	1068018..1068857 (+)	840	WP_004901951.1	phosphate ABC transporter ATP-binding protein PstB	-
FAZ25_RS05540 (FAZ25_05535)	pstB	1068854..1069624 (+)	771	WP_004901948.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40930.34 Da
• Isoelectric Point: 4.7188

>NTDB_id=360581 FAZ25_RS05500 WP_048801498.1 1060593..1061738(+) (recA) [Leuconostoc sp. LN180020]
MVTKKTTKKDDKDSQAKGRKAALDEALKKIEKNFGKGSVMVLGDNALTQIETYPSGSVKLDVALGVGGYPKGRIIEIYGP
ESSGKTTLALHAVAEVQKAGGTAAYIDAENALDVKYAEALGVQKDELLLSQPDTGEQGLEIADALVQSGAVDIIVVDSVA
ALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGTLNRTGTIAIFINQIREKIGVMFGNPETTPGGRALKFYSTIRLEVRR
STQIKDGTDVTGNLTKVKVVKNKVAPPFKVAEIDIMYGKGVSQTGEILDLGAEQEIIRKAGAFYYYDDVKIGQGREKAKE
FLDDPENADMRQTIYEKVRNAFGIGDGETAESDETTADKQKGAETIELASDTDDLTDEPIV

Nucleotide

• Length: 1146 bp

>NTDB_id=360581 FAZ25_RS05500 WP_048801498.1 1060593..1061738(+) (recA) [Leuconostoc sp. LN180020]
ATGGTCACAAAAAAGACGACTAAAAAAGATGATAAAGATAGCCAAGCTAAAGGCCGAAAAGCCGCTTTAGATGAAGCCTT
AAAAAAAATTGAGAAAAATTTTGGTAAGGGTTCAGTCATGGTTTTAGGTGACAATGCTTTGACGCAAATTGAGACTTATC
CTTCTGGGTCGGTTAAGCTAGATGTTGCGTTAGGTGTTGGTGGTTATCCCAAAGGCCGAATTATTGAAATATATGGACCA
GAATCCTCTGGAAAAACAACTTTAGCTTTACATGCGGTGGCTGAAGTGCAAAAGGCTGGTGGTACAGCAGCTTATATCGA
TGCGGAAAACGCTTTAGATGTAAAGTACGCTGAGGCATTGGGCGTACAAAAAGATGAATTGCTGCTATCACAACCAGATA
CTGGCGAACAAGGCTTAGAAATTGCTGATGCGCTAGTACAATCAGGTGCGGTCGATATTATTGTTGTTGATTCAGTCGCA
GCCCTTGTACCTCGAGCTGAAATTGAAGGTGAAATGGGTGATTCGCATGTTGGTTTGCAAGCACGATTAATGAGTCAAGC
GCTTCGTAAATTAGCTGGGACTTTAAATCGCACAGGAACCATTGCTATTTTTATTAACCAAATTCGTGAAAAAATTGGTG
TGATGTTTGGTAATCCTGAGACAACACCTGGTGGACGCGCGCTGAAGTTCTATTCAACAATTAGACTTGAAGTTCGTCGT
TCAACTCAAATTAAAGATGGTACGGATGTTACAGGTAACCTCACTAAGGTGAAGGTTGTAAAGAATAAAGTTGCGCCACC
ATTTAAAGTGGCAGAAATTGACATCATGTATGGCAAAGGTGTTTCTCAAACTGGTGAAATTTTAGATTTAGGTGCAGAAC
AAGAAATTATTCGCAAAGCTGGCGCTTTTTACTACTATGACGATGTGAAAATTGGTCAAGGCCGTGAAAAGGCAAAAGAA
TTTTTGGATGATCCAGAAAATGCCGATATGCGACAAACAATCTATGAAAAAGTTCGCAATGCTTTTGGTATAGGTGATGG
TGAAACAGCCGAATCCGATGAGACGACTGCAGACAAGCAAAAAGGCGCTGAGACGATAGAACTTGCTAGTGATACAGATG
ACTTGACAGATGAGCCAATTGTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (22-282)

3D structure

• AlphaFold DB: A0A7L8UYU1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	72.886	90.026	0.656
recA	Streptococcus mitis NCTC 12261	65	94.488	0.614
recA	Bacillus subtilis subsp. subtilis str. 168	70.859	85.564	0.606
recA	Streptococcus mitis SK321	65.625	92.388	0.606
recA	Streptococcus pneumoniae D39	64.124	92.913	0.596
recA	Streptococcus pneumoniae Rx1	64.124	92.913	0.596
recA	Streptococcus pneumoniae R6	64.124	92.913	0.596
recA	Streptococcus pneumoniae TIGR4	64.124	92.913	0.596
recA	Lactococcus lactis subsp. cremoris KW2	64.103	92.126	0.591
recA	Streptococcus pyogenes NZ131	64.74	90.814	0.588
recA	Streptococcus mutans UA159	63.689	91.076	0.58
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.87	90.551	0.551
recA	Ralstonia pseudosolanacearum GMI1000	65.079	82.677	0.538
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.671	90.814	0.533
recA	Acinetobacter baylyi ADP1	60.059	88.714	0.533
recA	Glaesserella parasuis strain SC1401	58.017	90.026	0.522
recA	Acinetobacter baumannii D1279779	61.371	84.252	0.517
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.939	85.827	0.514
recA	Pseudomonas stutzeri DSM 10701	60.436	84.252	0.509
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.436	84.252	0.509
recA	Vibrio cholerae strain A1552	60.436	84.252	0.509
recA	Neisseria gonorrhoeae MS11	60.252	83.202	0.501
recA	Neisseria gonorrhoeae MS11	60.252	83.202	0.501
recA	Neisseria gonorrhoeae strain FA1090	60.252	83.202	0.501
recA	Helicobacter pylori 26695	56.748	85.564	0.486
recA	Helicobacter pylori strain NCTC11637	56.748	85.564	0.486