Detailed information NTG0360151

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FA702_RS00555
• Genome accession: NZ_CP039695
• Coordinates: 98525..99595 (+)
• Length: 356 a.a.
• NCBI ID: WP_136954572.1
• Uniprot ID: A0A4D7DAB9
• Organism: Novosphingobium sp. EMRT-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 93525..104595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FA702_RS00540 (FA702_00540)	smpB	94827..95309 (+)	483	WP_124808682.1	SsrA-binding protein SmpB	-
FA702_RS00545 (FA702_00545)	-	95403..95963 (+)	561	WP_136957179.1	DUF2062 domain-containing protein	-
FA702_RS00550 (FA702_00550)	-	95960..98380 (+)	2421	WP_136954571.1	response regulator	-
FA702_RS00555 (FA702_00555)	recA	98525..99595 (+)	1071	WP_136954572.1	recombinase RecA	Machinery gene
FA702_RS00560 (FA702_00560)	-	99732..100550 (+)	819	WP_136954573.1	trans-aconitate 2-methyltransferase	-
FA702_RS00565 (FA702_00565)	alaS	100619..103270 (+)	2652	WP_136954574.1	alanine--tRNA ligase	-
FA702_RS00570 (FA702_00570)	-	103293..104366 (-)	1074	WP_136954575.1	sulfotransferase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 38386.96 Da
• Isoelectric Point: 5.5794

>NTDB_id=360151 FA702_RS00555 WP_136954572.1 98525..99595(+) (recA) [Novosphingobium sp. EMRT-2]
MAAQLKLIQEGKDKEMDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAISTGSLGLDIALGVGGLPRGRVIEVYGPE
SSGKTTLALHVIAEAQKNGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
GQIKDRDEIVGNSTRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQGRENAKNY
LRENKEVCDRLEAAIRGRTEQVAEGLMAGPDADDDI

Nucleotide

• Length: 1071 bp

>NTDB_id=360151 FA702_RS00555 WP_136954572.1 98525..99595(+) (recA) [Novosphingobium sp. EMRT-2]
ATGGCGGCGCAGCTCAAGCTCATTCAGGAAGGCAAAGACAAGGAAATGGATCGTCAGAAGGCGCTTGATGCGGCGCTCGC
CCAGATCGACCGGGCATTCGGCAAGGGCTCGGTGATGAAGCTCGGCTCGAAGGAGGCCATGCAGGTGGAAGCGATTTCCA
CCGGGTCGCTCGGGCTGGACATCGCGCTTGGGGTGGGCGGCCTGCCGCGCGGTCGCGTGATCGAAGTCTATGGGCCGGAA
AGCTCGGGCAAGACCACGCTGGCGCTGCACGTCATCGCCGAAGCGCAGAAGAACGGCGGCACCGCCGCGTTCGTCGACGC
CGAACACGCGCTCGATCCGGTCTATGCCAAGAAGCTGGGCGTCAACATCGACGAATTGATCGTCTCGCAGCCCGATACCG
GCGAACAGGCGCTGGAAATCACCGACACGCTGGTCCGTTCCAACGCGATCGACGTGCTGGTGGTGGACTCGGTCGCCGCG
CTTGTTCCGCGCGCCGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTCCAGGCGCGCCTGATGTCGCAGAGCCT
GCGCAAGCTGACCGGTTCGATCAGCCGTTCGCGCTGCATGGTGATCTTCATCAACCAGCTGCGCATGAAGATTGGCGTGA
TGTACGGCAATCCCGAGACCACGACCGGTGGCAACGCGCTCAAGTTCTATGCCTCGGTCCGTCTCGACATCCGCCGCACC
GGGCAGATCAAGGACCGTGACGAGATCGTCGGCAACTCCACGCGCGTCAAGGTCGTCAAGAACAAGGTGGCGCCGCCGTT
CAAGCAGGTCGAGTTCGACATCATGTATGGCGAGGGCATCTCCAAGATCGGCGAGATTCTCGATCTCGGGGTCAAGGCCG
GCCTGGTCGAGAAGTCGGGCGCGTGGTTCAGCTACGATTCGATCCGAATTGGCCAGGGGCGTGAGAACGCGAAGAACTAC
CTGCGCGAGAACAAGGAAGTTTGCGACCGTCTGGAAGCCGCCATTCGCGGCCGCACCGAACAGGTTGCCGAAGGACTGAT
GGCGGGGCCGGACGCGGACGACGACATCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-281)

3D structure

• AlphaFold DB: A0A4D7DAB9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	68.639	94.944	0.652
recA	Vibrio cholerae strain A1552	70.312	89.888	0.632
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.312	89.888	0.632
recA	Neisseria gonorrhoeae strain FA1090	69.782	90.169	0.629
recA	Neisseria gonorrhoeae MS11	69.782	90.169	0.629
recA	Neisseria gonorrhoeae MS11	69.782	90.169	0.629
recA	Glaesserella parasuis strain SC1401	69.906	89.607	0.626
recA	Ralstonia pseudosolanacearum GMI1000	70.455	86.517	0.61
recA	Acinetobacter baumannii D1279779	67.812	89.888	0.61
recA	Bacillus subtilis subsp. subtilis str. 168	67.812	89.888	0.61
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.258	91.573	0.607
recA	Acinetobacter baylyi ADP1	67.5	89.888	0.607
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.127	95.225	0.601
recA	Helicobacter pylori strain NCTC11637	62.832	95.225	0.598
recA	Helicobacter pylori 26695	62.537	95.225	0.596
recA	Streptococcus pneumoniae R6	60.641	96.348	0.584
recA	Streptococcus pneumoniae Rx1	60.641	96.348	0.584
recA	Streptococcus pneumoniae D39	60.641	96.348	0.584
recA	Streptococcus pneumoniae TIGR4	60.641	96.348	0.584
recA	Latilactobacillus sakei subsp. sakei 23K	64.688	89.888	0.581
recA	Streptococcus pyogenes NZ131	60.704	95.787	0.581
recA	Streptococcus mitis SK321	60.882	95.506	0.581
recA	Streptococcus mutans UA159	59.238	95.787	0.567
recA	Streptococcus mitis NCTC 12261	62.346	91.011	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.846	91.292	0.565
recA	Lactococcus lactis subsp. cremoris KW2	59.403	94.101	0.559