Detailed information NTG0035820

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DHCVS_RS07290
• Genome accession: NC_013552
• Coordinates: 1382652..1383665 (+)
• Length: 337 a.a.
• NCBI ID: WP_012882718.1
• Uniprot ID: A0A0C6EX13
• Organism: Dehalococcoides mccartyi VS
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1377652..1388665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DHCVS_RS07255 (DhcVS_1481)	tatC	1378878..1379666 (-)	789	WP_012882711.1	twin-arginine translocase subunit TatC	-
DHCVS_RS07260 (DhcVS_1482)	-	1379663..1379950 (-)	288	WP_012882712.1	twin-arginine translocase TatA/TatE family subunit	-
DHCVS_RS07265 (DhcVS_1483)	-	1380017..1380253 (-)	237	WP_012882713.1	twin-arginine translocase TatA/TatE family subunit	-
DHCVS_RS07270 (DhcVS_1484)	tatA	1380344..1380541 (-)	198	WP_012882714.1	twin-arginine translocase TatA/TatE family subunit	-
DHCVS_RS07275 (DhcVS_1485)	folP	1380788..1381636 (+)	849	WP_041917741.1	dihydropteroate synthase	-
DHCVS_RS07280 (DhcVS_1486)	folK	1381627..1382157 (+)	531	WP_012882716.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
DHCVS_RS07285 (DhcVS_1487)	queD	1382157..1382528 (+)	372	WP_012882717.1	6-carboxytetrahydropterin synthase QueD	-
DHCVS_RS07290 (DhcVS_1488)	recA	1382652..1383665 (+)	1014	WP_012882718.1	recombinase RecA	Machinery gene
DHCVS_RS07295 (DhcVS_1489)	-	1383754..1384398 (+)	645	WP_012882719.1	regulatory protein RecX	-
DHCVS_RS07300 (DhcVS_1490)	rny	1384467..1386050 (+)	1584	WP_012882720.1	ribonuclease Y	-
DHCVS_RS07305 (DhcVS_1491)	-	1386062..1386832 (+)	771	WP_012882721.1	TIGR00282 family metallophosphoesterase	-
DHCVS_RS07310 (DhcVS_1492)	-	1386835..1387698 (+)	864	WP_012882722.1	PHP domain-containing protein	-
DHCVS_RS07315 (DhcVS_1493)	-	1387695..1388393 (+)	699	WP_012882723.1	glycerol-3-phosphate acyltransferase	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36146.51 Da
• Isoelectric Point: 6.2983

>NTDB_id=35820 DHCVS_RS07290 WP_012882718.1 1382652..1383665(+) (recA) [Dehalococcoides mccartyi VS]
MTTEKDKALELTVGIIEKRFGKGSIMKLSDPSFRQTVEFIPTSSLALDIALGVGGIPRGRIAEIFGPEGSGKTTLAQHII
AQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGEEALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTSSIGQTRTAVIFINQLREKVGVMFGNPEVTPGGRALKFYSSVRIDLRRIETIKQGTIAVGT
RVRAKVVKNKVAPPFRTAEFDIMFDSGISREGNLIDLGVTSEVIRKAGAFFSYGDIRLGQGRESAKNYLAANPDLAQEIE
EKIRASAVTLCSIGDGD

Nucleotide

• Length: 1014 bp

>NTDB_id=35820 DHCVS_RS07290 WP_012882718.1 1382652..1383665(+) (recA) [Dehalococcoides mccartyi VS]
ATGACCACGGAAAAAGATAAGGCACTGGAACTCACTGTCGGTATAATAGAAAAACGTTTTGGCAAGGGTTCAATAATGAA
ACTGAGTGACCCTTCCTTCCGGCAAACAGTTGAGTTCATCCCTACAAGTTCACTGGCACTTGATATTGCCCTGGGCGTTG
GCGGAATTCCCAGAGGACGGATAGCTGAAATATTCGGCCCTGAAGGCTCCGGCAAGACTACTCTTGCCCAGCATATTATT
GCCCAAGCCCAAAAAATGGGCGAAAAAGCCGCCTATATAGACGTGGAACATGCCCTTGATCCTAAATACGCTTCAACCTG
CGGGGTTAATCTGGATGAGCTTTTAATATCTCAGCCGGATACCGGTGAGGAAGCGCTTGGTATTGCCGAAGAGTTGGTGA
GAAGCACCGCCATAGGGGTTATAGTGATTGACAGTGTGGCGGCGCTGGTACCCAAAGCCGAAATAGAAGGCGACATGGGT
GACTCACATGTAGGTTTGCAGGCCAGACTTATGTCTCAGGCACTGCGGAAATTGACCTCTTCCATCGGGCAAACCAGAAC
GGCCGTTATCTTTATAAACCAGTTGAGAGAAAAAGTGGGTGTCATGTTCGGCAATCCCGAAGTCACCCCCGGCGGCCGGG
CGCTTAAATTTTACAGTTCGGTGCGTATAGATCTAAGGCGCATAGAAACCATCAAGCAGGGCACCATAGCAGTTGGTACA
CGCGTAAGAGCCAAAGTGGTAAAAAACAAGGTTGCTCCTCCCTTCAGAACAGCTGAGTTTGATATCATGTTTGACTCTGG
TATCAGCCGCGAGGGCAACCTTATTGATTTGGGCGTAACCAGTGAAGTTATAAGGAAAGCAGGGGCTTTCTTTTCCTACG
GTGACATTCGCCTGGGGCAAGGCAGAGAGAGCGCCAAAAACTATCTGGCGGCAAATCCAGATCTGGCGCAGGAAATTGAA
GAAAAAATACGTGCCTCAGCAGTCACCCTTTGCAGTATTGGCGATGGCGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A0C6EX13

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	62.848	95.846	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	63.043	95.549	0.602
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae strain FA1090	60.308	96.439	0.582
recA	Streptococcus mitis NCTC 12261	60	96.439	0.579
recA	Streptococcus mitis SK321	60	96.439	0.579
recA	Streptococcus pneumoniae R6	59.509	96.736	0.576
recA	Streptococcus pneumoniae Rx1	59.509	96.736	0.576
recA	Streptococcus pneumoniae D39	59.509	96.736	0.576
recA	Streptococcus pneumoniae TIGR4	59.509	96.736	0.576
recA	Pseudomonas stutzeri DSM 10701	59.692	96.439	0.576
recA	Streptococcus pyogenes NZ131	59.692	96.439	0.576
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.568	96.142	0.573
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.021	97.033	0.573
recA	Lactococcus lactis subsp. cremoris KW2	58.716	97.033	0.57
recA	Vibrio cholerae strain A1552	59.259	96.142	0.57
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.259	96.142	0.57
recA	Glaesserella parasuis strain SC1401	59.502	95.252	0.567
recA	Ralstonia pseudosolanacearum GMI1000	61.812	91.691	0.567
recA	Streptococcus mutans UA159	58.462	96.439	0.564
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.798	97.033	0.561
recA	Helicobacter pylori strain NCTC11637	58.333	96.142	0.561
recA	Helicobacter pylori 26695	58.333	96.142	0.561
recA	Acinetobacter baylyi ADP1	56.325	98.516	0.555
recA	Acinetobacter baumannii D1279779	55.689	99.11	0.552