Detailed information NTG0357601

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: E5675_RS07190
• Genome accession: NZ_CP039250
• Coordinates: 1562828..1563907 (+)
• Length: 359 a.a.
• NCBI ID: WP_136173916.1
• Uniprot ID: A0A4P7RTD5
• Organism: Sphingopyxis sp. PAMC25046
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1557828..1568907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5675_RS07175 (E5675_07175)	-	1557832..1559874 (+)	2043	WP_136173913.1	M13-type metalloendopeptidase	-
E5675_RS07180 (E5675_07180)	-	1559967..1562342 (+)	2376	WP_136173914.1	response regulator	-
E5675_RS07185 (E5675_07185)	-	1562339..1562692 (+)	354	WP_136173915.1	response regulator	-
E5675_RS07190 (E5675_07190)	recA	1562828..1563907 (+)	1080	WP_136173916.1	recombinase RecA	Machinery gene
E5675_RS07195 (E5675_07195)	speB	1564034..1564879 (+)	846	WP_247594820.1	agmatinase	-
E5675_RS07200 (E5675_07200)	-	1564895..1565521 (+)	627	WP_136173918.1	glutathione S-transferase	-
E5675_RS07205 (E5675_07205)	-	1565511..1566104 (+)	594	WP_136173919.1	hypothetical protein	-
E5675_RS07210 (E5675_07210)	-	1566207..1566947 (+)	741	WP_136173920.1	hypothetical protein	-

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 38558.95 Da
• Isoelectric Point: 4.9705

>NTDB_id=357601 E5675_RS07190 WP_136173916.1 1562828..1563907(+) (recA) [Sphingopyxis sp. PAMC25046]
MAGQLSLVESGKSVNNTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAISTGSLGLDIALGVGGLPRGRVIEIYGP
ESSGKTTLALHTLAEAQKTGGTVAFVDAEHALDPVYARKLGVNIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVA
ALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
TGQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKSGAWFSYDSIRIGQGRENAKN
FLTENPELRERLEAAIRGRTDEVAEEMMAGPDEEGDDDI

Nucleotide

• Length: 1080 bp

>NTDB_id=357601 E5675_RS07190 WP_136173916.1 1562828..1563907(+) (recA) [Sphingopyxis sp. PAMC25046]
ATGGCCGGACAATTGTCACTCGTCGAATCGGGGAAATCAGTGAACAACACGGATAGGCAGAAGGCGCTTGACGCCGCGCT
CGCGCAGATCGATCGCGCGTTTGGCAAGGGCTCGGTGATGAAATTGGGCTCGAAAGAAGCGATGCAGGTCGAAGCGATCT
CGACGGGCTCGCTCGGCCTCGACATCGCGCTCGGCGTCGGCGGGTTGCCGCGCGGCCGCGTCATCGAAATCTACGGCCCC
GAAAGCTCGGGCAAGACCACCCTCGCGCTCCACACGCTCGCCGAGGCGCAGAAGACCGGCGGCACCGTCGCGTTCGTCGA
CGCCGAACATGCGCTCGACCCGGTCTATGCGCGCAAGCTCGGCGTCAACATCGATGAACTCATCGTGTCGCAGCCCGACA
CCGGCGAACAGGCGCTCGAAATCGTCGATACGCTCGTGCGCTCGAACGCGATCGACGTGCTTGTCGTCGACTCGGTCGCC
GCGCTCGTCCCGCGCGCCGAAATCGAAGGCGAAATGGGCGACAGCCACGTCGGCCTTCAGGCGCGTCTGATGTCGCAAAG
CTTGCGCAAGCTCACCGGCTCGATCAGCCGCTCGCGCTGCATGGTGATCTTCATCAACCAGCTGCGCATGAAGATCGGCG
TGATGTACGGCAACCCCGAAACCACGACCGGCGGCAATGCGCTCAAATTCTACGCCTCGGTCCGCCTCGACATCCGTCGC
ACCGGCCAGATCAAGAATGGCGACGAGATCGTCGGCAACACGACCCGCGTCAAGGTCGTCAAGAACAAGGTCGCGCCGCC
GTTCAAGCAGGTCGAATTCGACATCATGTACGGGCAGGGCATTTCGAAGATCGGCGAAATACTCGACATCGGCGTCAAGG
CCGGGCTGGTCGAGAAGTCGGGCGCCTGGTTCAGCTATGATTCGATCCGTATCGGGCAGGGCCGCGAAAATGCGAAGAAT
TTCCTGACCGAAAACCCCGAACTGCGCGAGCGGCTCGAAGCCGCGATCCGCGGCCGCACCGACGAAGTGGCCGAGGAAAT
GATGGCCGGCCCCGACGAAGAGGGCGACGACGACATCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-282)

3D structure

• AlphaFold DB: A0A4P7RTD5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	67.052	96.379	0.646
recA	Vibrio cholerae strain A1552	68.06	93.315	0.635
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.06	93.315	0.635
recA	Neisseria gonorrhoeae MS11	70.405	89.415	0.63
recA	Neisseria gonorrhoeae MS11	70.405	89.415	0.63
recA	Neisseria gonorrhoeae strain FA1090	70.405	89.415	0.63
recA	Glaesserella parasuis strain SC1401	68.712	90.808	0.624
recA	Acinetobacter baylyi ADP1	65.774	93.593	0.616
recA	Acinetobacter baumannii D1279779	68.125	89.136	0.607
recA	Ralstonia pseudosolanacearum GMI1000	70.779	85.794	0.607
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.159	91.365	0.604
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.791	95.822	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	66.355	89.415	0.593
recA	Latilactobacillus sakei subsp. sakei 23K	62.353	94.708	0.591
recA	Helicobacter pylori strain NCTC11637	61.947	94.429	0.585
recA	Helicobacter pylori 26695	61.652	94.429	0.582
recA	Streptococcus pneumoniae R6	59.538	96.379	0.574
recA	Streptococcus pneumoniae TIGR4	59.538	96.379	0.574
recA	Streptococcus pneumoniae Rx1	59.538	96.379	0.574
recA	Streptococcus pneumoniae D39	59.538	96.379	0.574
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.769	90.529	0.568
recA	Streptococcus mitis NCTC 12261	61.846	90.529	0.56
recA	Streptococcus mitis SK321	61.846	90.529	0.56
recA	Streptococcus pyogenes NZ131	61.728	90.251	0.557
recA	Streptococcus mutans UA159	60.802	90.251	0.549
recA	Lactococcus lactis subsp. cremoris KW2	59.259	90.251	0.535