Detailed information NTG0035521

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HNEAP_RS01760
• Genome accession: NC_013422
• Coordinates: 358362..359411 (+)
• Length: 349 a.a.
• NCBI ID: WP_012823253.1
• Uniprot ID: D0KXP4
• Organism: Halothiobacillus neapolitanus c2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 353362..364411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HNEAP_RS01745 (Hneap_0351)	rnr	353784..356195 (+)	2412	WP_012823250.1	ribonuclease R	-
HNEAP_RS01750 (Hneap_0352)	rlmB	356195..357001 (+)	807	WP_012823251.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
HNEAP_RS01755 (Hneap_0353)	-	357115..358290 (+)	1176	WP_012823252.1	pyridoxal phosphate-dependent aminotransferase	-
HNEAP_RS01760 (Hneap_0354)	recA	358362..359411 (+)	1050	WP_012823253.1	recombinase RecA	Machinery gene
HNEAP_RS01765 (Hneap_0355)	-	359427..359933 (+)	507	WP_012823254.1	regulatory protein RecX	-
HNEAP_RS01770 (Hneap_0357)	alaS	360107..362722 (+)	2616	WP_041600556.1	alanine--tRNA ligase	-
HNEAP_RS01775 (Hneap_0358)	-	362922..364154 (+)	1233	WP_012823257.1	aspartate kinase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37313.81 Da
• Isoelectric Point: 5.5070

>NTDB_id=35521 HNEAP_RS01760 WP_012823253.1 358362..359411(+) (recA) [Halothiobacillus neapolitanus c2]
MDENRKKALTAALSQIERQFGKGAVMRMNDTAGVDVPVVSTGSIALDAALGIGGLPRGRVVEIYGPESSGKTTLTLQVIA
QAQKTGGVCAFVDAEHALDPTYAQKLGVNVDDLLVSQPDTGEQALEITDMLVRSGAVDVVVVDSVAALVPKAEIEGEMGD
AHVGLQARLMSQALRKLTGNIKRTNCMVIFINQIRMKIGVSYGSPETTTGGNALKFYASVRLDIRRVGAVKKGEEIIGNQ
TRIKVVKNKMAPPFKVVDVDILYGEGISRLMELIDMATTHGLIQKAGAWYSCGDIRLGQGKDNARQYFVEHPELADDIEA
KLRASMLASTGKVAVRASEDDESSAVLED

Nucleotide

• Length: 1050 bp

>NTDB_id=35521 HNEAP_RS01760 WP_012823253.1 358362..359411(+) (recA) [Halothiobacillus neapolitanus c2]
ATGGACGAAAATCGTAAGAAAGCGCTGACGGCGGCATTAAGTCAGATCGAGCGACAGTTCGGTAAAGGGGCCGTGATGCG
GATGAACGACACGGCTGGTGTCGATGTGCCGGTCGTCAGTACCGGATCGATCGCACTGGATGCCGCTCTTGGTATTGGTG
GTTTGCCACGCGGCCGAGTAGTGGAAATTTATGGTCCTGAATCCTCGGGTAAAACGACACTGACACTGCAGGTGATTGCC
CAGGCGCAAAAAACCGGCGGCGTATGCGCCTTCGTGGATGCGGAGCACGCACTGGATCCCACCTATGCCCAGAAGCTGGG
TGTAAACGTAGATGATCTGCTGGTCAGCCAGCCGGATACGGGCGAGCAGGCACTGGAGATCACCGATATGCTGGTGCGTT
CCGGCGCAGTCGACGTTGTCGTGGTTGATTCCGTCGCCGCCTTGGTCCCCAAGGCCGAGATTGAAGGCGAGATGGGCGAT
GCCCACGTTGGTTTGCAGGCGCGTTTGATGAGTCAGGCATTGCGCAAGTTGACCGGCAACATCAAACGCACGAACTGCAT
GGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCAGTTATGGCAGCCCCGAGACGACAACCGGCGGCAATGCCT
TGAAGTTTTACGCTTCCGTTCGCTTGGATATCCGTCGCGTCGGTGCGGTCAAGAAGGGCGAAGAGATCATCGGGAACCAG
ACCCGGATCAAGGTCGTGAAAAATAAAATGGCGCCCCCGTTCAAGGTGGTTGATGTGGACATTCTCTACGGAGAAGGTAT
TTCCCGCCTGATGGAGTTGATCGATATGGCTACCACGCATGGCCTGATCCAGAAAGCGGGCGCGTGGTATTCCTGCGGTG
ACATCCGGTTGGGGCAGGGGAAGGACAACGCCCGGCAGTATTTTGTCGAGCACCCCGAATTGGCAGATGATATCGAAGCC
AAGTTGAGGGCCTCGATGCTGGCGTCGACGGGCAAAGTAGCGGTGCGTGCCTCCGAGGATGATGAGTCCTCAGCGGTGCT
CGAAGACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: D0KXP4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	70.435	98.854	0.696
recA	Acinetobacter baumannii D1279779	68.103	99.713	0.679
recA	Acinetobacter baylyi ADP1	67.816	99.713	0.676
recA	Glaesserella parasuis strain SC1401	66.764	98.281	0.656
recA	Vibrio cholerae strain A1552	69.113	93.696	0.648
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.113	93.696	0.648
recA	Neisseria gonorrhoeae MS11	69.231	93.123	0.645
recA	Neisseria gonorrhoeae MS11	69.231	93.123	0.645
recA	Neisseria gonorrhoeae strain FA1090	69.231	93.123	0.645
recA	Ralstonia pseudosolanacearum GMI1000	71.704	89.112	0.639
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.933	98.281	0.599
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.961	95.415	0.582
recA	Latilactobacillus sakei subsp. sakei 23K	62.848	92.55	0.582
recA	Streptococcus mutans UA159	61.846	93.123	0.576
recA	Helicobacter pylori strain NCTC11637	60.856	93.696	0.57
recA	Bacillus subtilis subsp. subtilis str. 168	62.187	91.691	0.57
recA	Streptococcus pyogenes NZ131	60.923	93.123	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	93.696	0.567
recA	Helicobacter pylori 26695	60.55	93.696	0.567
recA	Streptococcus mitis NCTC 12261	57.225	99.14	0.567
recA	Streptococcus pneumoniae R6	60.123	93.41	0.562
recA	Streptococcus pneumoniae TIGR4	60.123	93.41	0.562
recA	Streptococcus pneumoniae Rx1	60.123	93.41	0.562
recA	Streptococcus pneumoniae D39	60.123	93.41	0.562
recA	Streptococcus mitis SK321	57.185	97.708	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.692	93.123	0.556