Detailed information NTG0351831

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: E3D81_RS02440
• Genome accession: NZ_CP038159
• Coordinates: 561692..562717 (+)
• Length: 341 a.a.
• NCBI ID: WP_134776287.1
• Uniprot ID: -
• Organism: Sphingobacterium sp. CZ-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 556692..567717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3D81_RS02430 (E3D81_02430)	-	558952..560574 (+)	1623	WP_134776285.1	S8 family peptidase	-
E3D81_RS02435 (E3D81_02435)	nth	560887..561549 (+)	663	WP_134776286.1	endonuclease III	-
E3D81_RS02440 (E3D81_02440)	recA	561692..562717 (+)	1026	WP_134776287.1	recombinase RecA	Machinery gene
E3D81_RS02445 (E3D81_02445)	-	562887..564101 (+)	1215	WP_134776288.1	metallophosphoesterase family protein	-
E3D81_RS02450 (E3D81_02450)	-	564236..564931 (-)	696	WP_134776289.1	ABC transporter ATP-binding protein	-
E3D81_RS02455 (E3D81_02455)	-	564970..566448 (-)	1479	WP_134776290.1	DUF5687 family protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36750.20 Da
• Isoelectric Point: 4.8818

>NTDB_id=351831 E3D81_RS02440 WP_134776287.1 561692..562717(+) (recA) [Sphingobacterium sp. CZ-2]
MSNSDKLKALQLTLDKLEKSYGKGTIMKLGDSAVEPIEAISTGSLGLDIALGIGGVPKGRIIEIYGPESSGKTTLATHIV
AEAQKKGGIAAIIDAEHAFDKYYAQKLGVDIENLLISQPDNGEQALEIADNLIRSGAIDVIVIDSVAALVPKGEIEGEMG
ESKMGLQARLMSQALRKLTGTIAKTNCCCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRTSQIKDSDEVAGN
RVKVKIVKNKVAPPFRVAEFDIMFGEGISKVGEIIDLGVEYNIIKKSGSWFSYGDTKLGQGRDAVKSLLFDNPDLMDELE
AKIRAEVTGQDLDQAIAKEEE

Nucleotide

• Length: 1026 bp

>NTDB_id=351831 E3D81_RS02440 WP_134776287.1 561692..562717(+) (recA) [Sphingobacterium sp. CZ-2]
ATGAGCAACTCAGACAAATTAAAAGCTTTACAGCTTACCTTAGATAAACTAGAGAAATCCTACGGAAAGGGAACCATCAT
GAAATTGGGAGATTCTGCCGTAGAACCGATCGAAGCTATTTCTACCGGTTCTTTGGGATTGGACATCGCCTTAGGTATTG
GTGGAGTTCCAAAAGGTCGTATCATTGAAATATACGGTCCGGAATCCTCAGGTAAAACCACGTTAGCTACACATATTGTT
GCTGAAGCTCAGAAAAAAGGGGGTATCGCTGCCATCATTGATGCGGAACATGCCTTTGATAAATACTATGCCCAAAAACT
GGGGGTAGATATCGAGAACCTGTTGATCTCACAACCAGATAATGGTGAACAGGCATTGGAAATTGCCGATAACCTGATCC
GTTCAGGAGCGATCGATGTGATCGTGATTGACTCCGTAGCCGCTTTGGTACCGAAGGGAGAGATCGAAGGCGAAATGGGA
GAATCTAAAATGGGTCTTCAGGCGCGTTTGATGTCCCAAGCCTTACGTAAATTAACCGGAACGATTGCCAAAACAAACTG
TTGTTGTATTTTCATCAACCAATTACGTGAAAAAATTGGGGTGATGTTCGGAAACCCGGAAACGACAACTGGTGGTAATG
CATTGAAATTCTATGCTTCTGTACGTTTGGATATCCGCCGTACTTCGCAGATCAAAGATTCGGATGAGGTAGCAGGTAAC
CGCGTAAAAGTGAAGATCGTTAAAAATAAAGTTGCTCCTCCATTCCGAGTGGCAGAATTTGACATCATGTTCGGTGAAGG
TATTTCCAAAGTTGGGGAGATCATCGATTTAGGTGTGGAATATAACATCATCAAGAAATCAGGCTCATGGTTCAGCTATG
GGGACACCAAATTGGGACAAGGTCGTGACGCCGTGAAATCCCTGTTGTTTGATAATCCGGATTTGATGGATGAATTAGAG
GCTAAGATCCGTGCAGAAGTTACTGGACAAGATCTTGACCAAGCCATCGCGAAAGAAGAAGAATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	72.205	97.067	0.701
recA	Neisseria gonorrhoeae strain FA1090	66.667	95.015	0.633
recA	Neisseria gonorrhoeae MS11	66.667	95.015	0.633
recA	Neisseria gonorrhoeae MS11	66.667	95.015	0.633
recA	Acinetobacter baylyi ADP1	63.609	99.12	0.63
recA	Ralstonia pseudosolanacearum GMI1000	69.156	90.323	0.625
recA	Helicobacter pylori strain NCTC11637	65.337	95.601	0.625
recA	Helicobacter pylori 26695	65.031	95.601	0.622
recA	Acinetobacter baumannii D1279779	62.242	99.413	0.619
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.015	94.721	0.616
recA	Bacillus subtilis subsp. subtilis str. 168	65.109	94.135	0.613
recA	Glaesserella parasuis strain SC1401	65.517	93.548	0.613
recA	Pseudomonas stutzeri DSM 10701	62.769	95.308	0.598
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.417	98.534	0.595
recA	Vibrio cholerae strain A1552	60.417	98.534	0.595
recA	Streptococcus pneumoniae Rx1	58.772	100	0.589
recA	Streptococcus pneumoniae TIGR4	58.772	100	0.589
recA	Streptococcus pneumoniae R6	58.772	100	0.589
recA	Streptococcus pneumoniae D39	58.772	100	0.589
recA	Lactococcus lactis subsp. cremoris KW2	61.043	95.601	0.584
recA	Latilactobacillus sakei subsp. sakei 23K	60.923	95.308	0.581
recA	Streptococcus pyogenes NZ131	61.111	95.015	0.581
recA	Streptococcus mitis NCTC 12261	60.55	95.894	0.581
recA	Streptococcus mitis SK321	60.245	95.894	0.578
recA	Streptococcus mutans UA159	58.282	95.601	0.557
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.481	95.015	0.537