Detailed information NTG0349536

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EC81_RS09935
• Genome accession: NZ_CP036539
• Coordinates: 2339350..2340393 (-)
• Length: 347 a.a.
• NCBI ID: WP_005775938.1
• Uniprot ID: A0A4Q0TXI0
• Organism: Bacteroides fragilis strain DCMOUH0017B
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2334350..2345393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC81_RS09900 (EC81_009905)	-	2334552..2335133 (+)	582	WP_005775931.1	DUF6621 family protein	-
EC81_RS09905 (EC81_009910)	-	2335158..2336054 (+)	897	WP_005775932.1	LysR substrate-binding domain-containing protein	-
EC81_RS09910 (EC81_009915)	-	2336133..2337125 (+)	993	WP_005818794.1	YeiH family protein	-
EC81_RS09915 (EC81_009920)	-	2337209..2337892 (-)	684	WP_005818796.1	DUF4252 domain-containing protein	-
EC81_RS09920 (EC81_009925)	-	2337899..2338426 (-)	528	WP_032543334.1	hypothetical protein	-
EC81_RS09925 (EC81_009930)	-	2338407..2338922 (-)	516	WP_032543333.1	RNA polymerase sigma factor	-
EC81_RS09930 (EC81_009935)	-	2339064..2339288 (+)	225	WP_005809822.1	hypothetical protein	-
EC81_RS09935 (EC81_009940)	recA	2339350..2340393 (-)	1044	WP_005775938.1	recombinase RecA	Machinery gene
EC81_RS09940 (EC81_009945)	bcp	2340404..2340850 (-)	447	WP_005775939.1	thioredoxin-dependent thiol peroxidase	-
EC81_RS09945 (EC81_009950)	-	2340936..2342129 (-)	1194	WP_005809817.1	saccharopine dehydrogenase family protein	-
EC81_RS09950 (EC81_009955)	-	2342224..2343474 (-)	1251	WP_032543332.1	hypothetical protein	-
EC81_RS09955 (EC81_009960)	-	2343599..2344390 (+)	792	WP_005809815.1	META domain-containing protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37567.89 Da
• Isoelectric Point: 5.2085

>NTDB_id=349536 EC81_RS09935 WP_005775938.1 2339350..2340393(-) (recA) [Bacteroides fragilis strain DCMOUH0017B]
MAKKEDELNFETDNNKMASSEKLKALQAAMDKIEKSFGKGSIMKMGEEVVEQVEVIPTGSIALNAALGVGGYPRGRIIEI
YGPESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDRFYAAKLGVDVDNLFISQPDNGEQALEIAEQLIRSSAIDIIVVD
SVAALTPKAEIEGDMGDNKVGLQARLMSQALRKLTSAVSKTRTTCVFINQLREKIGVMFGNPETTTGGNALKFYASVRLD
IRGSQQIKDGEEVIGKQTKVKVVKNKVAPPFRKAEFDIMFGEGISHSGEIIDLGADLGIIKKSGSWYSYNDTKLGQGRDA
AKQCIADNPELAEELEGLIFEKLREHK

Nucleotide

• Length: 1044 bp

>NTDB_id=349536 EC81_RS09935 WP_005775938.1 2339350..2340393(-) (recA) [Bacteroides fragilis strain DCMOUH0017B]
ATGGCAAAGAAAGAAGACGAGTTAAATTTTGAAACAGATAATAATAAAATGGCATCAAGCGAAAAATTAAAAGCCTTACA
GGCTGCCATGGACAAGATAGAGAAAAGCTTCGGTAAAGGTTCTATCATGAAAATGGGTGAAGAAGTGGTAGAACAAGTAG
AAGTAATTCCTACAGGTTCGATTGCACTGAATGCAGCATTAGGCGTAGGCGGTTATCCCCGCGGAAGAATAATTGAAATT
TATGGTCCGGAATCATCCGGTAAAACCACACTGGCGATCCACGCCATTGCAGAAGCACAAAAAGCCGGTGGAATTGCCGC
TTTCATTGATGCAGAACATGCCTTTGATCGTTTTTATGCGGCCAAGCTGGGAGTGGATGTAGATAATCTGTTTATCTCTC
AACCGGATAACGGAGAACAGGCATTGGAAATTGCGGAGCAATTGATCCGCTCTTCAGCCATCGACATCATCGTAGTAGAC
TCCGTAGCCGCCTTGACTCCGAAAGCAGAAATAGAAGGAGACATGGGTGACAATAAGGTAGGTTTGCAGGCTCGATTAAT
GTCTCAGGCATTACGCAAGTTGACATCAGCAGTGAGTAAAACCCGTACGACTTGTGTTTTCATCAACCAATTGCGTGAGA
AAATCGGTGTAATGTTCGGTAATCCCGAAACAACAACCGGTGGCAATGCATTGAAGTTCTATGCTTCGGTACGTTTGGAT
ATCCGCGGTTCACAACAAATAAAAGACGGTGAAGAGGTGATTGGTAAACAAACAAAAGTCAAGGTTGTGAAGAATAAAGT
AGCCCCTCCTTTCCGTAAAGCAGAATTCGATATCATGTTTGGCGAAGGTATATCACATTCTGGAGAGATTATTGATCTGG
GAGCTGATTTGGGAATCATCAAGAAAAGTGGTTCATGGTATAGCTATAATGACACGAAGCTGGGACAGGGTCGCGACGCA
GCTAAACAATGTATTGCCGATAATCCCGAACTCGCCGAAGAACTGGAAGGATTAATCTTCGAAAAATTGAGAGAACACAA
ATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (24-285)

3D structure

• AlphaFold DB: A0A4Q0TXI0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	71.212	95.101	0.677
recA	Ralstonia pseudosolanacearum GMI1000	66.159	94.524	0.625
recA	Neisseria gonorrhoeae MS11	67.081	92.795	0.622
recA	Neisseria gonorrhoeae MS11	67.081	92.795	0.622
recA	Neisseria gonorrhoeae strain FA1090	67.081	92.795	0.622
recA	Bacillus subtilis subsp. subtilis str. 168	66.055	94.236	0.622
recA	Streptococcus mitis NCTC 12261	63.235	97.983	0.62
recA	Streptococcus mitis SK321	63.235	97.983	0.62
recA	Streptococcus pneumoniae Rx1	61.671	100	0.617
recA	Streptococcus pneumoniae D39	61.671	100	0.617
recA	Streptococcus pneumoniae R6	61.671	100	0.617
recA	Streptococcus pneumoniae TIGR4	61.671	100	0.617
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.667	90.778	0.605
recA	Streptococcus pyogenes NZ131	61.471	97.983	0.602
recA	Streptococcus mutans UA159	61.834	97.406	0.602
recA	Glaesserella parasuis strain SC1401	65.506	91.066	0.597
recA	Lactococcus lactis subsp. cremoris KW2	60.294	97.983	0.591
recA	Helicobacter pylori strain NCTC11637	64.241	91.066	0.585
recA	Helicobacter pylori 26695	64.241	91.066	0.585
recA	Acinetobacter baumannii D1279779	62.733	92.795	0.582
recA	Acinetobacter baylyi ADP1	62.733	92.795	0.582
recA	Latilactobacillus sakei subsp. sakei 23K	63.009	91.931	0.579
recA	Vibrio cholerae strain A1552	61.728	93.372	0.576
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.728	93.372	0.576
recA	Pseudomonas stutzeri DSM 10701	61.801	92.795	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	94.236	0.571