Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   EWI30_RS05045 Genome accession   NZ_CP035738
Coordinates   1047353..1048411 (+) Length   352 a.a.
NCBI ID   WP_114978663.1    Uniprot ID   A0A9X5IMK9
Organism   Enterobacter cloacae strain CZ-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1042353..1053411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EWI30_RS05020 (EWI30_05020) mltB 1042872..1043972 (+) 1101 WP_207220717.1 lytic murein transglycosylase B -
  EWI30_RS05025 (EWI30_05025) - 1044231..1044884 (+) 654 WP_129995107.1 ATP-binding cassette domain-containing protein -
  EWI30_RS05030 (EWI30_05030) - 1044881..1045741 (+) 861 WP_114978661.1 metal ABC transporter permease -
  EWI30_RS05035 (EWI30_05035) - 1045756..1046634 (+) 879 WP_129995108.1 metal ABC transporter substrate-binding protein -
  EWI30_RS05040 (EWI30_05040) pncC 1046766..1047263 (+) 498 WP_049006085.1 nicotinamide-nucleotide amidase -
  EWI30_RS05045 (EWI30_05045) recA 1047353..1048411 (+) 1059 WP_114978663.1 recombinase RecA Machinery gene
  EWI30_RS05050 (EWI30_05050) recX 1048479..1048979 (+) 501 WP_129995109.1 recombination regulator RecX -
  EWI30_RS05055 (EWI30_05055) alaS 1049111..1051738 (+) 2628 WP_129995110.1 alanine--tRNA ligase -
  EWI30_RS05060 (EWI30_05060) csrA 1051980..1052165 (+) 186 WP_000906486.1 carbon storage regulator CsrA -

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 37841.21 Da        Isoelectric Point: 4.7456

>NTDB_id=344155 EWI30_RS05045 WP_114978663.1 1047353..1048411(+) (recA) [Enterobacter cloacae strain CZ-1]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLNNQDSTPDFAVDSADAEETNEDF

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=344155 EWI30_RS05045 WP_114978663.1 1047353..1048411(+) (recA) [Enterobacter cloacae strain CZ-1]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGACGTGGAAACCATCTCCACTGGTTCGCTTTCTCTGGATATCGCGCTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGACCAGAGTCCTCAGGTAAAACGACGCTGACGCTGCAGGTT
ATCGCTGCGGCACAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCTATTTATGCTCGTAA
ACTGGGCGTTGATATCGATAACCTGCTTTGTTCTCAGCCAGACACCGGTGAACAGGCGCTGGAAATTTGTGACGCGCTGG
CGCGTTCAGGTGCTGTTGACGTTATCGTGGTCGACTCCGTTGCCGCACTGACGCCAAAAGCTGAAATCGAAGGCGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCAATGCGTAAGCTGGCCGGTAACCTGAAACAGTCCAA
CACACTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGCGTAATGTTCGGTAACCCGGAAACCACCACTGGTGGTA
ACGCGCTGAAATTCTACGCGTCTGTCCGTCTTGATATCCGCCGTATTGGCGCGGTAAAAGAGGGTGAGAACGTCGTCGGA
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATTGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGGATTAACTTCTTCGGTGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGTGCCTGGTATAGCT
ACAACGGTGACAAAATTGGTCAGGGTAAAGCAAATGCGATCTCCTGGCTGAAAGAGAACCCGGCAGCGGCGAAAGAAATT
GAGAAGAAAGTGCGTGAGCTTCTGCTGAACAACCAGGACTCCACACCTGATTTCGCAGTTGATAGCGCGGATGCTGAAGA
AACCAACGAAGATTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Vibrio cholerae O1 biovar El Tor strain E7946

84.894

94.034

0.798

  recA Vibrio cholerae strain A1552

84.894

94.034

0.798

  recA Pseudomonas stutzeri DSM 10701

73.199

98.58

0.722

  recA Acinetobacter baumannii D1279779

72.046

98.58

0.71

  recA Acinetobacter baylyi ADP1

74.39

93.182

0.693

  recA Glaesserella parasuis strain SC1401

68.661

99.716

0.685

  recA Ralstonia pseudosolanacearum GMI1000

68.563

94.886

0.651

  recA Neisseria gonorrhoeae MS11

69.325

92.614

0.642

  recA Neisseria gonorrhoeae MS11

69.325

92.614

0.642

  recA Neisseria gonorrhoeae strain FA1090

69.325

92.614

0.642

  recA Helicobacter pylori strain NCTC11637

61.721

95.739

0.591

  recA Helicobacter pylori 26695

61.424

95.739

0.588

  recA Streptococcus mutans UA159

58.974

99.716

0.588

  recA Streptococcus pneumoniae Rx1

62.848

91.761

0.577

  recA Streptococcus pneumoniae TIGR4

62.848

91.761

0.577

  recA Streptococcus pneumoniae R6

62.848

91.761

0.577

  recA Streptococcus pneumoniae D39

62.848

91.761

0.577

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.037

92.045

0.571

  recA Streptococcus mitis SK321

62.229

91.761

0.571

  recA Streptococcus mitis NCTC 12261

62.229

91.761

0.571

  recA Streptococcus pyogenes NZ131

61.846

92.33

0.571

  recA Lactococcus lactis subsp. cremoris KW2

61.92

91.761

0.568

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.06

94.602

0.568

  recA Bacillus subtilis subsp. subtilis str. 168

62.305

91.193

0.568

  recA Latilactobacillus sakei subsp. sakei 23K

60.923

92.33

0.562

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.748

91.193

0.554


Multiple sequence alignment