Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BACIH_RS08035 | Genome accession | NZ_CP044360 |
| Coordinates | 1565715..1566077 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain V167 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1560715..1571077
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BACIH_RS08005 (BACIH_1629) | flgD | 1561618..1562058 (+) | 441 | WP_012117554.1 | flagellar hook assembly protein FlgD | - |
| BACIH_RS08010 (BACIH_1630) | flgG | 1562083..1562859 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| BACIH_RS08015 (BACIH_1631) | - | 1562899..1563114 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| BACIH_RS08020 (BACIH_1632) | fliL | 1563111..1563530 (+) | 420 | WP_003154241.1 | flagellar basal body-associated protein FliL | - |
| BACIH_RS08025 (BACIH_1633) | fliM | 1563564..1564562 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| BACIH_RS08030 (BACIH_1634) | fliY | 1564552..1565688 (+) | 1137 | WP_012117555.1 | flagellar motor switch phosphatase FliY | - |
| BACIH_RS08035 (BACIH_1635) | pilH | 1565715..1566077 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| BACIH_RS08040 (BACIH_1636) | fliZ | 1566092..1566745 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| BACIH_RS08045 (BACIH_1637) | fliP | 1566738..1567403 (+) | 666 | WP_012117556.1 | flagellar type III secretion system pore protein FliP | - |
| BACIH_RS08050 (BACIH_1638) | fliQ | 1567418..1567687 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| BACIH_RS08055 (BACIH_1639) | fliR | 1567694..1568473 (+) | 780 | WP_012117557.1 | flagellar biosynthetic protein FliR | - |
| BACIH_RS08060 (BACIH_1640) | flhB | 1568473..1569552 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=342264 BACIH_RS08035 WP_003154238.1 1565715..1566077(+) (pilH) [Bacillus amyloliquefaciens strain V167]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=342264 BACIH_RS08035 WP_003154238.1 1565715..1566077(+) (pilH) [Bacillus amyloliquefaciens strain V167]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATTATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATTATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |