Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EM861_RS17715 | Genome accession | NZ_CP034754 |
| Coordinates | 3677280..3678338 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei subsp. hoffmannii strain Eh1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3644909..3678338 | 3677280..3678338 | within | 0 |
Gene organization within MGE regions
Location: 3644909..3678338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EM861_RS17530 (EM861_17730) | - | 3644909..3646489 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| EM861_RS17535 (EM861_17735) | - | 3646501..3647916 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| EM861_RS17540 (EM861_17740) | fdrA | 3647916..3649457 (-) | 1542 | WP_022649122.1 | acyl-CoA synthetase FdrA | - |
| EM861_RS17545 (EM861_17745) | - | 3649566..3650171 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| EM861_RS17550 (EM861_17750) | - | 3650492..3651421 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| EM861_RS17555 (EM861_17755) | - | 3651418..3651576 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| EM861_RS17560 (EM861_17760) | - | 3651756..3652274 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| EM861_RS17565 (EM861_17765) | - | 3652357..3652536 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| EM861_RS17570 (EM861_17770) | stpA | 3652574..3652978 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| EM861_RS17575 (EM861_17775) | alaE | 3653476..3653925 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| EM861_RS17580 (EM861_17780) | - | 3653958..3654302 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| EM861_RS17585 (EM861_17785) | - | 3654461..3654787 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| EM861_RS17590 (EM861_17790) | nrdH | 3655031..3655270 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| EM861_RS17595 (EM861_17795) | nrdI | 3655267..3655677 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| EM861_RS17600 (EM861_17800) | nrdE | 3655650..3657794 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| EM861_RS17605 (EM861_17805) | nrdF | 3657804..3658763 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| EM861_RS17610 (EM861_17810) | proV | 3659097..3660299 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| EM861_RS17615 (EM861_17815) | proW | 3660292..3661356 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| EM861_RS17620 (EM861_17820) | proX | 3661366..3662361 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| EM861_RS17625 (EM861_17825) | - | 3662571..3663755 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| EM861_RS17630 (EM861_17830) | emrR | 3664070..3664600 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| EM861_RS17635 (EM861_17835) | emrA | 3664729..3665901 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| EM861_RS17640 (EM861_17840) | emrB | 3665918..3667465 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| EM861_RS17645 (EM861_17845) | - | 3667550..3668656 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| EM861_RS25315 | - | 3668967..3669110 (+) | 144 | Protein_3479 | hypothetical protein | - |
| EM861_RS17655 (EM861_17855) | luxS | 3669172..3669687 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| EM861_RS17660 (EM861_17860) | gshA | 3669840..3671384 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| EM861_RS17665 (EM861_17865) | - | 3671468..3671896 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| EM861_RS17670 (EM861_17870) | yqaB | 3671893..3672459 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| EM861_RS17700 (EM861_17900) | csrA | 3673525..3673710 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| EM861_RS17705 (EM861_17905) | alaS | 3673952..3676579 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| EM861_RS17710 (EM861_17910) | recX | 3676711..3677211 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| EM861_RS17715 (EM861_17915) | recA | 3677280..3678338 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=332863 EM861_RS17715 WP_022649140.1 3677280..3678338(-) (recA) [Enterobacter hormaechei subsp. hoffmannii strain Eh1]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=332863 EM861_RS17715 WP_022649140.1 3677280..3678338(-) (recA) [Enterobacter hormaechei subsp. hoffmannii strain Eh1]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.