Detailed information NTG0332205

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EKO29_RS14800
• Genome accession: NZ_CP034660
• Coordinates: 3431947..3432972 (-)
• Length: 341 a.a.
• NCBI ID: WP_126669587.1
• Uniprot ID: A0A3Q9G9Y3
• Organism: Colwellia sp. Arc7-635
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3426947..3437972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EKO29_RS14790 (EKO29_14790)	-	3428994..3430214 (-)	1221	WP_241238744.1	FecR family protein	-
EKO29_RS14795 (EKO29_14795)	-	3430222..3431541 (-)	1320	WP_126669586.1	surface lipoprotein assembly modifier	-
EKO29_RS14800 (EKO29_14800)	recA	3431947..3432972 (-)	1026	WP_126669587.1	recombinase RecA	Machinery gene
EKO29_RS14805 (EKO29_14805)	mutS	3433339..3435906 (+)	2568	WP_126669588.1	DNA mismatch repair protein MutS	-
EKO29_RS14810 (EKO29_14810)	rpoS	3436441..3437367 (-)	927	WP_126669589.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36856.56 Da
• Isoelectric Point: 5.8890

>NTDB_id=332205 EKO29_RS14800 WP_126669587.1 3431947..3432972(-) (recA) [Colwellia sp. Arc7-635]
MDDNKEKALSAALSQIERQFGKGSIMKLGDNHTMDVETISTGSLGLDIALGAGGLPLGRVVEIYGPESSGKTTLTLEVIA
EAQRNGKICAFVDAEHALDPIYAAKLGVNINELLVSQPDTGEQALEICDMLTRSGAIDIIVVDSVAALTPKAEIEGDMGD
SHMGLQARMLSQAMRKLTGNLKKSNTMIIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKNGDEIIGNE
TRVKVVKNKIAPPFKQVEFQILYGEGINSLGELVDLGVKNEMVEKAGAWYSYKGDKIGQGKANAAKYLKENPEIAKELDT
RLRELLLLKNKPVETPEVPAK

Nucleotide

• Length: 1026 bp

>NTDB_id=332205 EKO29_RS14800 WP_126669587.1 3431947..3432972(-) (recA) [Colwellia sp. Arc7-635]
ATGGACGATAACAAAGAAAAAGCATTATCAGCTGCCTTAAGCCAAATAGAACGTCAATTTGGTAAAGGATCAATCATGAA
ATTAGGCGACAATCATACGATGGATGTAGAAACAATTTCTACAGGATCATTAGGATTAGATATCGCTTTAGGAGCCGGCG
GTTTACCTCTTGGCCGTGTTGTTGAAATTTACGGTCCAGAATCAAGTGGTAAAACGACGTTAACACTTGAAGTTATTGCT
GAAGCGCAGCGTAATGGCAAAATTTGTGCCTTCGTAGATGCTGAGCATGCACTTGACCCTATTTATGCTGCAAAATTAGG
CGTTAACATAAATGAATTATTAGTTTCTCAACCTGATACCGGTGAGCAAGCTCTTGAGATTTGTGACATGCTAACACGCT
CTGGCGCTATCGATATTATTGTTGTCGATTCGGTTGCGGCATTAACACCAAAAGCTGAAATTGAAGGCGATATGGGTGAT
TCACACATGGGCTTACAAGCTCGTATGTTATCGCAAGCCATGCGTAAATTAACGGGTAATTTGAAAAAATCAAATACCAT
GATTATCTTTATCAACCAAATTCGTATGAAAATTGGCGTTATGTTTGGTTCACCAGAAACTACAACGGGTGGTAATGCTC
TGAAGTTTTACGCCTCTGTTCGTTTAGATATTCGTCGTATCGGTGCCGTTAAAAATGGTGATGAAATTATTGGTAACGAA
ACGCGTGTAAAAGTGGTTAAAAACAAGATTGCACCTCCATTTAAACAAGTTGAGTTCCAAATCTTATATGGTGAAGGTAT
CAACAGCTTAGGTGAATTAGTTGACCTAGGTGTGAAGAATGAAATGGTCGAAAAAGCCGGTGCTTGGTACAGCTATAAAG
GCGACAAGATTGGTCAAGGTAAAGCAAATGCGGCTAAATACTTGAAAGAAAACCCAGAAATAGCCAAAGAACTAGATACG
CGTTTACGTGAACTCTTGTTATTAAAAAATAAGCCAGTTGAAACACCTGAAGTGCCAGCTAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A3Q9G9Y3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	82.875	95.894	0.795
recA	Vibrio cholerae strain A1552	82.875	95.894	0.795
recA	Acinetobacter baylyi ADP1	75.684	96.481	0.73
recA	Acinetobacter baumannii D1279779	74.924	95.894	0.718
recA	Pseudomonas stutzeri DSM 10701	74.695	96.188	0.718
recA	Neisseria gonorrhoeae MS11	71.779	95.601	0.686
recA	Neisseria gonorrhoeae MS11	71.779	95.601	0.686
recA	Neisseria gonorrhoeae strain FA1090	71.779	95.601	0.686
recA	Glaesserella parasuis strain SC1401	72.222	95.015	0.686
recA	Ralstonia pseudosolanacearum GMI1000	69.775	91.202	0.636
recA	Helicobacter pylori strain NCTC11637	60.87	100	0.616
recA	Helicobacter pylori 26695	60.58	100	0.613
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.517	93.548	0.613
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.791	98.24	0.607
recA	Bacillus subtilis subsp. subtilis str. 168	61.818	96.774	0.598
recA	Streptococcus pneumoniae D39	62.539	94.721	0.592
recA	Streptococcus mitis NCTC 12261	62.539	94.721	0.592
recA	Streptococcus pneumoniae Rx1	62.539	94.721	0.592
recA	Streptococcus pneumoniae R6	62.539	94.721	0.592
recA	Streptococcus pneumoniae TIGR4	62.539	94.721	0.592
recA	Streptococcus mitis SK321	62.229	94.721	0.589
recA	Streptococcus mutans UA159	61.231	95.308	0.584
recA	Streptococcus pyogenes NZ131	60.615	95.308	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.442	93.548	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	57.53	97.361	0.56
recA	Lactococcus lactis subsp. cremoris KW2	58.514	94.721	0.554