Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EEI45_RS06690 | Genome accession | NZ_CP034234 |
| Coordinates | 1349099..1350124 (-) | Length | 341 a.a. |
| NCBI ID | WP_181950054.1 | Uniprot ID | - |
| Organism | Erysipelothrix piscisicarius strain 15TAL0474 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1322189..1376379 | 1349099..1350124 | within | 0 |
Gene organization within MGE regions
Location: 1322189..1376379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEI45_RS06600 (EEI45_06615) | mscL | 1323314..1323721 (+) | 408 | WP_125164618.1 | large-conductance mechanosensitive channel protein MscL | - |
| EEI45_RS06605 (EEI45_06620) | - | 1323879..1326014 (-) | 2136 | WP_125164619.1 | ATP-dependent RecD-like DNA helicase | - |
| EEI45_RS06610 (EEI45_06625) | - | 1326031..1326759 (-) | 729 | WP_125164620.1 | CPBP family intramembrane glutamic endopeptidase | - |
| EEI45_RS06615 (EEI45_06630) | mnmA | 1326743..1327859 (-) | 1117 | Protein_1411 | tRNA 2-thiouridine(34) synthase MnmA | - |
| EEI45_RS06620 (EEI45_06635) | spx | 1327856..1328293 (-) | 438 | WP_003773302.1 | transcriptional regulator Spx | - |
| EEI45_RS06625 (EEI45_06640) | trpS | 1328407..1329402 (-) | 996 | WP_125164621.1 | tryptophan--tRNA ligase | - |
| EEI45_RS06630 (EEI45_06645) | - | 1329404..1330120 (-) | 717 | WP_125164622.1 | biosynthetic peptidoglycan transglycosylase | - |
| EEI45_RS06635 (EEI45_06650) | - | 1330161..1330385 (-) | 225 | WP_125164623.1 | YneF family protein | - |
| EEI45_RS06645 (EEI45_06660) | - | 1330673..1332358 (+) | 1686 | WP_125164624.1 | proline--tRNA ligase | - |
| EEI45_RS09490 | - | 1332429..1333502 (-) | 1074 | WP_228410280.1 | Cna B-type domain-containing protein | - |
| EEI45_RS09495 | - | 1333499..1334773 (-) | 1275 | WP_228410281.1 | SpaA isopeptide-forming pilin-related protein | - |
| EEI45_RS06655 (EEI45_06670) | - | 1335048..1335422 (+) | 375 | WP_181950053.1 | helix-turn-helix domain-containing protein | - |
| EEI45_RS09500 | - | 1335470..1335688 (+) | 219 | WP_228410282.1 | hypothetical protein | - |
| EEI45_RS06660 (EEI45_06675) | - | 1335769..1336278 (+) | 510 | WP_228410283.1 | DDE-type integrase/transposase/recombinase | - |
| EEI45_RS09505 | - | 1336335..1337888 (-) | 1554 | WP_228410284.1 | Cna B-type domain-containing protein | - |
| EEI45_RS06665 (EEI45_06680) | - | 1337924..1342312 (-) | 4389 | WP_228410285.1 | Cna B-type domain-containing protein | - |
| EEI45_RS09510 | - | 1342494..1343855 (-) | 1362 | WP_228410286.1 | DNA translocase FtsK | - |
| EEI45_RS09515 | - | 1343859..1344848 (-) | 990 | WP_228410287.1 | hypothetical protein | - |
| EEI45_RS06675 (EEI45_06690) | - | 1344863..1346002 (-) | 1140 | WP_228410288.1 | ribonuclease J | - |
| EEI45_RS09520 | - | 1345950..1346519 (-) | 570 | WP_228410289.1 | ribonuclease J | - |
| EEI45_RS06680 (EEI45_06695) | - | 1346663..1347427 (-) | 765 | WP_125164625.1 | TIGR00282 family metallophosphoesterase | - |
| EEI45_RS06685 (EEI45_06700) | rny | 1347427..1348983 (-) | 1557 | WP_125164626.1 | ribonuclease Y | - |
| EEI45_RS06690 (EEI45_06705) | recA | 1349099..1350124 (-) | 1026 | WP_181950054.1 | recombinase RecA | Machinery gene |
| EEI45_RS06695 (EEI45_06710) | pgsA | 1350156..1350749 (-) | 594 | WP_125164628.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| EEI45_RS06700 (EEI45_06715) | - | 1350749..1351690 (-) | 942 | WP_228410290.1 | helix-turn-helix domain-containing protein | - |
| EEI45_RS06710 (EEI45_06725) | - | 1352158..1352472 (-) | 315 | WP_013852834.1 | DivIVA domain-containing protein | - |
| EEI45_RS06715 (EEI45_06730) | - | 1352725..1353179 (+) | 455 | Protein_1434 | Holliday junction resolvase RecU | - |
| EEI45_RS06720 (EEI45_06735) | - | 1353176..1356232 (+) | 3057 | WP_125164630.1 | transglycosylase domain-containing protein | - |
| EEI45_RS06725 (EEI45_06740) | alr | 1356286..1357404 (-) | 1119 | WP_125164631.1 | alanine racemase | - |
| EEI45_RS06730 (EEI45_06745) | - | 1357401..1358417 (-) | 1017 | WP_125164632.1 | D-alanine--D-alanine ligase family protein | - |
| EEI45_RS06735 (EEI45_06750) | murF | 1358418..1359740 (-) | 1323 | WP_125164633.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| EEI45_RS06740 (EEI45_06755) | nth | 1359737..1360357 (-) | 621 | WP_125164634.1 | endonuclease III | - |
| EEI45_RS06745 (EEI45_06760) | - | 1360354..1360854 (-) | 501 | WP_125164635.1 | DnaD domain-containing protein | - |
| EEI45_RS06750 (EEI45_06765) | - | 1360857..1361318 (-) | 462 | WP_125164636.1 | transporter | - |
| EEI45_RS06755 (EEI45_06770) | - | 1361457..1362860 (-) | 1404 | WP_228410291.1 | hypothetical protein | - |
| EEI45_RS09525 | - | 1362908..1363450 (-) | 543 | WP_228410292.1 | dockerin type I repeat-containing protein | - |
| EEI45_RS06760 (EEI45_06775) | - | 1363429..1364703 (-) | 1275 | WP_228410293.1 | N-acetylglucosaminidase | - |
| EEI45_RS06765 (EEI45_06780) | - | 1364855..1365514 (+) | 660 | WP_125164638.1 | hemolysin III family protein | - |
| EEI45_RS06770 (EEI45_06785) | - | 1365527..1365970 (-) | 444 | WP_125164639.1 | hypothetical protein | - |
| EEI45_RS06775 (EEI45_06790) | - | 1366041..1367105 (-) | 1065 | WP_125164640.1 | RIP metalloprotease | - |
| EEI45_RS06780 (EEI45_06795) | - | 1367115..1367882 (-) | 768 | WP_125164641.1 | phosphatidate cytidylyltransferase | - |
| EEI45_RS06785 (EEI45_06800) | - | 1367884..1368564 (-) | 681 | WP_125164642.1 | isoprenyl transferase | - |
| EEI45_RS06790 (EEI45_06805) | frr | 1368567..1369112 (-) | 546 | WP_125164643.1 | ribosome recycling factor | - |
| EEI45_RS06795 (EEI45_06810) | pyrH | 1369115..1369828 (-) | 714 | WP_125164644.1 | UMP kinase | - |
| EEI45_RS06800 (EEI45_06815) | tsf | 1369880..1370764 (-) | 885 | WP_125164645.1 | translation elongation factor Ts | - |
| EEI45_RS06805 (EEI45_06820) | rpsB | 1370757..1371761 (-) | 1005 | WP_228410294.1 | 30S ribosomal protein S2 | - |
| EEI45_RS06810 (EEI45_06825) | - | 1371917..1373059 (-) | 1143 | WP_125164646.1 | pyridoxal phosphate-dependent aminotransferase | - |
| EEI45_RS06815 (EEI45_06830) | - | 1373049..1373432 (-) | 384 | WP_125164647.1 | hypothetical protein | - |
| EEI45_RS06820 (EEI45_06835) | - | 1373583..1374857 (+) | 1275 | WP_125164648.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EEI45_RS06825 (EEI45_06840) | trmD | 1374964..1375686 (-) | 723 | WP_125164649.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| EEI45_RS06830 (EEI45_06845) | rimM | 1375686..1376183 (-) | 498 | WP_125164650.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37088.47 Da Isoelectric Point: 4.9795
>NTDB_id=329975 EEI45_RS06690 WP_181950054.1 1349099..1350124(-) (recA) [Erysipelothrix piscisicarius strain 15TAL0474]
MEDAKKDKVLDDAIKQIEKQFGKGSIMRLGDRAAVDIDAISSGSLSLDAALGIGGYPKGRIIEIYGPESSGKTTLALHAI
AEVQKAGGKAAFIDAENAIDPIYAQNLGVNIDDLILSQPDSGEQGLEIVDVLVRSGAVDLIVVDSVAALVPQAELDGEMG
DAQVGLQARMMSKAMRKLSGGMNRGECTAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDIRRSEQIKQGTDIVGN
KANIKVVKNKVAPPFRTTQVEIIYGKGISYIGEVIDLCVQYDFINKSGSWYSYKDEKIGQGREAVRSFLEDNPKITEEIA
AQIREIILPKREVLEKKEEKE
MEDAKKDKVLDDAIKQIEKQFGKGSIMRLGDRAAVDIDAISSGSLSLDAALGIGGYPKGRIIEIYGPESSGKTTLALHAI
AEVQKAGGKAAFIDAENAIDPIYAQNLGVNIDDLILSQPDSGEQGLEIVDVLVRSGAVDLIVVDSVAALVPQAELDGEMG
DAQVGLQARMMSKAMRKLSGGMNRGECTAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDIRRSEQIKQGTDIVGN
KANIKVVKNKVAPPFRTTQVEIIYGKGISYIGEVIDLCVQYDFINKSGSWYSYKDEKIGQGREAVRSFLEDNPKITEEIA
AQIREIILPKREVLEKKEEKE
Nucleotide
Download Length: 1026 bp
>NTDB_id=329975 EEI45_RS06690 WP_181950054.1 1349099..1350124(-) (recA) [Erysipelothrix piscisicarius strain 15TAL0474]
ATGGAAGACGCAAAAAAAGATAAAGTTCTTGATGATGCAATAAAACAAATCGAAAAACAATTTGGTAAGGGTTCAATTAT
GCGCTTGGGTGATCGAGCTGCGGTTGATATTGACGCTATTAGTTCAGGATCGCTCAGTTTGGATGCTGCACTTGGAATTG
GCGGATACCCTAAAGGTCGTATTATTGAAATTTATGGCCCTGAATCAAGCGGTAAAACAACGCTTGCATTACATGCGATT
GCGGAAGTGCAAAAAGCGGGTGGTAAAGCTGCATTTATCGATGCTGAAAATGCGATTGATCCTATTTATGCTCAAAATTT
AGGTGTTAACATTGACGATTTAATTCTTTCACAACCGGATAGTGGTGAACAAGGATTGGAAATTGTGGATGTCTTAGTTC
GTAGCGGTGCTGTTGATTTAATTGTCGTTGATAGTGTTGCGGCACTGGTACCACAAGCGGAACTCGATGGTGAAATGGGT
GATGCTCAAGTCGGTTTACAAGCACGAATGATGTCTAAAGCAATGCGTAAGCTATCCGGTGGCATGAACCGAGGGGAATG
TACCGCAATTTTCATTAATCAGCTTCGTGAAAAAGTGGGAATTATGTTTGGTAATCCTGAAACAACACCAGGTGGCCGTG
CGTTGAAGTTCTACTCTTCAGTTCGACTCGATATTCGTCGCAGTGAACAAATTAAACAAGGGACGGATATTGTTGGGAAT
AAAGCCAATATTAAAGTCGTAAAAAATAAAGTAGCCCCACCTTTTAGAACCACACAAGTTGAAATCATTTATGGTAAAGG
TATTAGTTATATTGGTGAAGTCATTGATCTCTGTGTTCAATATGACTTTATCAATAAGAGTGGATCTTGGTATTCTTACA
AAGATGAAAAAATCGGACAGGGTCGTGAAGCGGTTCGAAGTTTCTTAGAAGATAATCCTAAGATAACAGAAGAGATTGCT
GCACAGATTCGCGAGATTATTTTACCGAAACGTGAAGTTTTAGAGAAAAAAGAGGAAAAAGAATGA
ATGGAAGACGCAAAAAAAGATAAAGTTCTTGATGATGCAATAAAACAAATCGAAAAACAATTTGGTAAGGGTTCAATTAT
GCGCTTGGGTGATCGAGCTGCGGTTGATATTGACGCTATTAGTTCAGGATCGCTCAGTTTGGATGCTGCACTTGGAATTG
GCGGATACCCTAAAGGTCGTATTATTGAAATTTATGGCCCTGAATCAAGCGGTAAAACAACGCTTGCATTACATGCGATT
GCGGAAGTGCAAAAAGCGGGTGGTAAAGCTGCATTTATCGATGCTGAAAATGCGATTGATCCTATTTATGCTCAAAATTT
AGGTGTTAACATTGACGATTTAATTCTTTCACAACCGGATAGTGGTGAACAAGGATTGGAAATTGTGGATGTCTTAGTTC
GTAGCGGTGCTGTTGATTTAATTGTCGTTGATAGTGTTGCGGCACTGGTACCACAAGCGGAACTCGATGGTGAAATGGGT
GATGCTCAAGTCGGTTTACAAGCACGAATGATGTCTAAAGCAATGCGTAAGCTATCCGGTGGCATGAACCGAGGGGAATG
TACCGCAATTTTCATTAATCAGCTTCGTGAAAAAGTGGGAATTATGTTTGGTAATCCTGAAACAACACCAGGTGGCCGTG
CGTTGAAGTTCTACTCTTCAGTTCGACTCGATATTCGTCGCAGTGAACAAATTAAACAAGGGACGGATATTGTTGGGAAT
AAAGCCAATATTAAAGTCGTAAAAAATAAAGTAGCCCCACCTTTTAGAACCACACAAGTTGAAATCATTTATGGTAAAGG
TATTAGTTATATTGGTGAAGTCATTGATCTCTGTGTTCAATATGACTTTATCAATAAGAGTGGATCTTGGTATTCTTACA
AAGATGAAAAAATCGGACAGGGTCGTGAAGCGGTTCGAAGTTTCTTAGAAGATAATCCTAAGATAACAGAAGAGATTGCT
GCACAGATTCGCGAGATTATTTTACCGAAACGTGAAGTTTTAGAGAAAAAAGAGGAAAAAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.