Detailed information NTG0327508

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EHF44_RS03035
• Genome accession: NZ_CP033969
• Coordinates: 294419..295480 (+)
• Length: 353 a.a.
• NCBI ID: WP_124682378.1
• Uniprot ID: A0A3G8GX02
• Organism: Cupriavidus pauculus strain FDAARGOS_614
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 289419..300480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHF44_RS03015 (EHF44_03015)	-	289519..291210 (-)	1692	WP_124682374.1	MFS transporter	-
EHF44_RS03020 (EHF44_03020)	-	291526..291873 (-)	348	WP_124682375.1	DUF4212 domain-containing protein	-
EHF44_RS03025 (EHF44_03025)	-	291870..293438 (-)	1569	WP_124682376.1	sensor histidine kinase	-
EHF44_RS03030 (EHF44_03030)	-	293466..294155 (-)	690	WP_124682377.1	response regulator transcription factor	-
EHF44_RS03035 (EHF44_03035)	recA	294419..295480 (+)	1062	WP_124682378.1	recombinase RecA	Machinery gene
EHF44_RS03040 (EHF44_03040)	recX	295658..296110 (+)	453	WP_124682379.1	recombination regulator RecX	-
EHF44_RS03045 (EHF44_03045)	-	296451..297122 (+)	672	WP_124682380.1	DUF2889 domain-containing protein	-
EHF44_RS03050 (EHF44_03050)	sucC	297210..298376 (+)	1167	WP_124682381.1	ADP-forming succinate--CoA ligase subunit beta	-
EHF44_RS03055 (EHF44_03055)	sucD	298445..299326 (+)	882	WP_124682382.1	succinate--CoA ligase subunit alpha	-
EHF44_RS03060 (EHF44_03060)	-	299616..300314 (+)	699	WP_124682383.1	TerC family protein	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37533.00 Da
• Isoelectric Point: 4.9367

>NTDB_id=327508 EHF44_RS03035 WP_124682378.1 294419..295480(+) (recA) [Cupriavidus pauculus strain FDAARGOS_614]
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGDVEQDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYASKLGVDVGDLLISQPDTGEQALEITDALVRSGSIDMIVIDSVAALVP
KAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
KKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKSGAWYSYNGEKIGQGKDNAREFLRE
NPDIASEIENKVRAALGVALTNPVLAAPAEVDN

Nucleotide

• Length: 1062 bp

>NTDB_id=327508 EHF44_RS03035 WP_124682378.1 294419..295480(+) (recA) [Cupriavidus pauculus strain FDAARGOS_614]
ATGGACGACAAGAAGGCCGGCGCCGGCGTGAGCGCTGAGAAGCAGAAGGCGCTTGCCGCCGCGCTCTCCCAGATCGAAAA
GCAGTTCGGCAAGGGCTCGATCATGCGCCTGGGCGATGGCGACGTGGAACAGGATATCCAGGTGGTGTCCACCGGCTCGC
TGGGGCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTGGTCGAGATCTACGGTCCGGAATCGTCGGGC
AAGACCACGCTGACGCTGCAGGTGGTGGCCGAGATGCAGAAGCTGGGCGGCACCTGCGCGTTCATCGACGCGGAACACGC
GCTGGACGTGCAGTACGCCAGCAAGCTGGGCGTGGACGTGGGCGACCTGCTGATCTCGCAGCCGGACACGGGCGAGCAGG
CGCTGGAGATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACATGATCGTGATCGACTCGGTGGCCGCGCTGGTGCCG
AAGGCCGAAATCGAAGGCGAGATGGGCGATTCCCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCT
GACCGGCACGATCAAGCGCACCAACTGCCTGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTTGGAT
CACCCGAAACGACGACCGGCGGTAACGCGCTGAAGTTCTACGCGTCGGTGCGCCTGGACATCCGCCGCATCGGCTCGATC
AAGAAAGGCGACGAGGTGGTCGGCAACGAGACCAAGGTCAAGGTGGTCAAGAACAAGGTCTCGCCGCCGTTCCGCGAGGC
GTTCTTCGACATCCTCTACGGCCAGGGCATCTCGCGCCAGGGCGAGATCATCGACCTCGGCGTGGACGCCAAGATCGTCG
AGAAGTCGGGCGCCTGGTACAGCTACAACGGCGAGAAGATCGGCCAGGGCAAGGACAACGCCCGCGAATTCCTGCGCGAG
AACCCGGACATCGCCTCGGAAATCGAGAACAAGGTCCGTGCCGCGCTGGGCGTGGCGCTGACCAACCCGGTGCTGGCCGC
ACCGGCCGAAGTCGACAACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (16-278)

3D structure

• AlphaFold DB: A0A3G8GX02

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	86.119	100	0.861
recA	Pseudomonas stutzeri DSM 10701	75.684	93.201	0.705
recA	Neisseria gonorrhoeae MS11	74.32	93.768	0.697
recA	Neisseria gonorrhoeae MS11	74.32	93.768	0.697
recA	Neisseria gonorrhoeae strain FA1090	74.32	93.768	0.697
recA	Acinetobacter baylyi ADP1	74.923	91.501	0.686
recA	Acinetobacter baumannii D1279779	73.556	93.201	0.686
recA	Glaesserella parasuis strain SC1401	69.795	96.601	0.674
recA	Vibrio cholerae O1 biovar El Tor strain E7946	73.375	91.501	0.671
recA	Vibrio cholerae strain A1552	73.375	91.501	0.671
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.046	93.201	0.606
recA	Helicobacter pylori 26695	64.742	93.201	0.603
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.031	92.351	0.601
recA	Helicobacter pylori strain NCTC11637	64.438	93.201	0.601
recA	Bacillus subtilis subsp. subtilis str. 168	64.526	92.635	0.598
recA	Latilactobacillus sakei subsp. sakei 23K	63.609	92.635	0.589
recA	Streptococcus mitis NCTC 12261	61.631	93.768	0.578
recA	Streptococcus pneumoniae Rx1	61.631	93.768	0.578
recA	Streptococcus pneumoniae D39	61.631	93.768	0.578
recA	Streptococcus pneumoniae R6	61.631	93.768	0.578
recA	Streptococcus pneumoniae TIGR4	61.631	93.768	0.578
recA	Streptococcus mutans UA159	61.515	93.484	0.575
recA	Lactococcus lactis subsp. cremoris KW2	61.329	93.768	0.575
recA	Streptococcus mitis SK321	61.329	93.768	0.575
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.846	92.068	0.569
recA	Streptococcus pyogenes NZ131	60.182	93.201	0.561