Detailed information NTG0325982

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EGX85_RS01405
• Genome accession: NZ_CP033814
• Coordinates: 265442..266488 (-)
• Length: 348 a.a.
• NCBI ID: WP_011275914.1
• Uniprot ID: A0A2A1KBT9
• Organism: Staphylococcus haemolyticus strain FDAARGOS_517
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	263852..265168	265442..266488	flank	274

Gene organization within MGE regions

Location: 263852..266488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGX85_RS01400 (EGX85_01405)	-	263852..265168 (+)	1317	WP_011275188.1	ISL3 family transposase	-
EGX85_RS01405 (EGX85_01410)	recA	265442..266488 (-)	1047	WP_011275914.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37781.73 Da
• Isoelectric Point: 5.0065

>NTDB_id=325982 EGX85_RS01405 WP_011275914.1 265442..266488(-) (recA) [Staphylococcus haemolyticus strain FDAARGOS_517]
MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGEVIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKTYLKENPQVKEEIDR
KLREKLGIFDGDVDEKEEDAPQTLFVEE

Nucleotide

• Length: 1047 bp

>NTDB_id=325982 EGX85_RS01405 WP_011275914.1 265442..266488(-) (recA) [Staphylococcus haemolyticus strain FDAARGOS_517]
TTGGATAATGATCGTCAAAAAGCTTTAGATACAGTTATAAAAAATATGGAAAAATCATTCGGTAAAGGTGCCGTTATGAA
ACTAGGCGATAATAAAGGACGCCGTGTTTCAAGTGTTTCAAGTGGTTCAGTTACATTAGATAACGCATTAGGTGTAGGTG
GCTATCCTAAAGGTAGAATTATAGAGATTTATGGACCTGAAAGTTCTGGTAAAACAACAGTAGCTTTACATGCTATTGCA
GAGGTACAAAAGAACGGTGGCGTTGCTGCATTTATCGACGCTGAACACGCGCTTGATCCGGTATATGCAGAAGCATTAGG
TGTAGATATTGATAATTTATATCTATCACAACCAGACCATGGTGAACAAGGTTTAGAGATTGCTGAAGCTTTCGTTCGAA
GTGGTGCGGTTGATATTGTAGTAGTTGACTCTGTTGCCGCATTAACACCTAAAGCGGAAATTGAAGGTGAAATGGGCGAT
ACGCATGTAGGACTTCAAGCTCGCTTAATGTCACAGGCGTTACGTAAATTATCTGGTGCAATTTCAAAATCAAATACAAC
AGCTATTTTCATTAACCAAATTCGTGAAAAAGTTGGTGTAATGTTTGGTAACCCAGAAACTACACCTGGTGGACGTGCAT
TAAAATTCTATAGTTCTGTTCGTTTAGAAGTTCGTCGTGCTGAGCAGTTAAAACAAGGCCAAGAAATTGTTGGTAACAGA
ACTAAAATTAAAGTTGTCAAAAACAAAGTTGCACCGCCTTTTAGAGTCGCTGAAGTAGATATTATGTATGGTCAAGGTAT
CTCTAAAGAAGGTGAAGTGATTGATCTTGGTGTTGAAAATGACATCGTAGATAAATCAGGTGCATGGTACTCATATAATG
GTGATCGAATGGGTCAAGGTAAAGAGAATGTAAAAACATATCTCAAAGAAAATCCTCAAGTTAAAGAAGAAATCGATCGT
AAGTTACGAGAAAAACTAGGTATTTTCGATGGAGATGTTGATGAAAAAGAAGAAGATGCACCTCAAACATTATTCGTTGA
AGAATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A2A1KBT9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	76.994	93.678	0.721
recA	Latilactobacillus sakei subsp. sakei 23K	70.088	97.989	0.687
recA	Streptococcus pyogenes NZ131	68.389	94.54	0.647
recA	Streptococcus mitis NCTC 12261	63.818	100	0.644
recA	Acinetobacter baumannii D1279779	63.977	99.713	0.638
recA	Neisseria gonorrhoeae strain FA1090	63.689	99.713	0.635
recA	Neisseria gonorrhoeae MS11	63.689	99.713	0.635
recA	Neisseria gonorrhoeae MS11	63.689	99.713	0.635
recA	Streptococcus pneumoniae R6	66.066	95.69	0.632
recA	Streptococcus pneumoniae Rx1	66.066	95.69	0.632
recA	Streptococcus pneumoniae D39	66.066	95.69	0.632
recA	Streptococcus pneumoniae TIGR4	66.066	95.69	0.632
recA	Streptococcus mitis SK321	66.066	95.69	0.632
recA	Streptococcus mutans UA159	63.953	98.851	0.632
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.412	97.701	0.629
recA	Lactococcus lactis subsp. cremoris KW2	65.861	95.115	0.626
recA	Acinetobacter baylyi ADP1	66.258	93.678	0.621
recA	Helicobacter pylori 26695	65.549	94.253	0.618
recA	Helicobacter pylori strain NCTC11637	65.244	94.253	0.615
recA	Vibrio cholerae strain A1552	65.031	93.678	0.609
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.031	93.678	0.609
recA	Ralstonia pseudosolanacearum GMI1000	65.815	89.943	0.592
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.934	95.115	0.589
recA	Pseudomonas stutzeri DSM 10701	62.27	93.678	0.583
recA	Glaesserella parasuis strain SC1401	60.991	92.816	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.129	91.667	0.56