Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EGX96_RS04515 | Genome accession | NZ_CP033810 |
| Coordinates | 877621..878760 (-) | Length | 379 a.a. |
| NCBI ID | WP_001085741.1 | Uniprot ID | A0AAV3JP53 |
| Organism | Streptococcus sp. FDAARGOS_520 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 869563..918015 | 877621..878760 | within | 0 |
Gene organization within MGE regions
Location: 869563..918015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX96_RS04465 (EGX96_04465) | - | 870026..870517 (-) | 492 | WP_000776874.1 | GNAT family N-acetyltransferase | - |
| EGX96_RS04470 (EGX96_04470) | - | 870526..871458 (-) | 933 | WP_000939688.1 | Gfo/Idh/MocA family protein | - |
| EGX96_RS04475 (EGX96_04475) | - | 871471..871614 (-) | 144 | WP_000521645.1 | hypothetical protein | - |
| EGX96_RS04480 (EGX96_04480) | nrdD | 871689..873887 (-) | 2199 | WP_000989500.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| EGX96_RS04485 (EGX96_04485) | - | 873986..875527 (-) | 1542 | WP_000230040.1 | membrane protein | - |
| EGX96_RS11270 (EGX96_04490) | - | 875573..875695 (-) | 123 | WP_001285711.1 | hypothetical protein | - |
| EGX96_RS04495 (EGX96_04495) | - | 875777..876094 (-) | 318 | WP_000940932.1 | DUF1292 domain-containing protein | - |
| EGX96_RS04500 (EGX96_04500) | ruvX | 876120..876539 (-) | 420 | WP_001222109.1 | Holliday junction resolvase RuvX | - |
| EGX96_RS04505 (EGX96_04505) | - | 876539..876805 (-) | 267 | WP_000507056.1 | IreB family regulatory phosphoprotein | - |
| EGX96_RS04510 (EGX96_04510) | spx | 877007..877405 (-) | 399 | WP_000591161.1 | transcriptional regulator Spx | - |
| EGX96_RS04515 (EGX96_04515) | recA | 877621..878760 (-) | 1140 | WP_001085741.1 | recombinase RecA | Machinery gene |
| EGX96_RS04520 (EGX96_04520) | - | 878834..880095 (-) | 1262 | Protein_863 | competence/damage-inducible protein A | - |
| EGX96_RS04525 (EGX96_04525) | - | 880184..880735 (-) | 552 | WP_000817341.1 | DNA-3-methyladenine glycosylase I | - |
| EGX96_RS04530 (EGX96_04530) | ruvA | 880758..881348 (-) | 591 | WP_000272487.1 | Holliday junction branch migration protein RuvA | - |
| EGX96_RS04535 (EGX96_04535) | - | 881350..882582 (-) | 1233 | WP_000657476.1 | MFS transporter | - |
| EGX96_RS04540 (EGX96_04540) | mutL | 882614..884593 (-) | 1980 | WP_001054074.1 | DNA mismatch repair endonuclease MutL | - |
| EGX96_RS04550 (EGX96_04550) | - | 884813..885016 (+) | 204 | WP_000191849.1 | cold-shock protein | - |
| EGX96_RS04555 (EGX96_04555) | mutS | 885073..887649 (-) | 2577 | WP_001118377.1 | DNA mismatch repair protein MutS | - |
| EGX96_RS04560 (EGX96_04560) | argR | 887706..888143 (-) | 438 | WP_001033152.1 | arginine repressor | - |
| EGX96_RS04565 (EGX96_04565) | argS | 888365..890056 (+) | 1692 | WP_000379868.1 | arginine--tRNA ligase | - |
| EGX96_RS04570 (EGX96_04570) | - | 890144..890452 (+) | 309 | WP_001138859.1 | bacteriocin immunity protein | - |
| EGX96_RS04575 (EGX96_04575) | - | 890479..891351 (-) | 873 | WP_000915479.1 | YitT family protein | - |
| EGX96_RS04580 (EGX96_04580) | - | 891459..892403 (-) | 945 | WP_000857770.1 | YitT family protein | - |
| EGX96_RS04585 (EGX96_04585) | aspS | 892393..894144 (-) | 1752 | WP_000830929.1 | aspartate--tRNA ligase | - |
| EGX96_RS04590 (EGX96_04590) | hisS | 894237..895517 (-) | 1281 | WP_000775901.1 | histidine--tRNA ligase | - |
| EGX96_RS04595 (EGX96_04595) | rpmF | 895737..895919 (+) | 183 | WP_000290414.1 | 50S ribosomal protein L32 | - |
| EGX96_RS04600 (EGX96_04600) | rpmG | 895935..896084 (+) | 150 | WP_001265622.1 | 50S ribosomal protein L33 | - |
| EGX96_RS04605 (EGX96_04605) | - | 896232..896753 (-) | 522 | WP_011058389.1 | ClbS/DfsB family four-helix bundle protein | - |
| EGX96_RS04610 (EGX96_04610) | - | 896851..898335 (-) | 1485 | WP_001205484.1 | site-specific integrase | - |
| EGX96_RS04615 (EGX96_04615) | - | 898345..898593 (-) | 249 | WP_000212595.1 | hypothetical protein | - |
| EGX96_RS04620 (EGX96_04620) | - | 898659..899687 (-) | 1029 | WP_000370558.1 | replication initiation factor domain-containing protein | - |
| EGX96_RS04625 (EGX96_04625) | - | 899690..900121 (-) | 432 | WP_000159997.1 | hypothetical protein | - |
| EGX96_RS11290 (EGX96_04630) | - | 900191..900400 (-) | 210 | WP_000860007.1 | hypothetical protein | - |
| EGX96_RS04635 (EGX96_04635) | - | 900397..900852 (-) | 456 | WP_001008113.1 | hypothetical protein | - |
| EGX96_RS04640 (EGX96_04640) | - | 900852..901067 (-) | 216 | WP_001077089.1 | hypothetical protein | - |
| EGX96_RS04645 (EGX96_04645) | - | 901390..902310 (+) | 921 | WP_000461681.1 | helix-turn-helix domain-containing protein | - |
| EGX96_RS04650 (EGX96_04650) | - | 902331..902732 (+) | 402 | Protein_888 | Fic/DOC family N-terminal domain-containing protein | - |
| EGX96_RS04655 (EGX96_04655) | - | 902767..903572 (+) | 806 | WP_088181596.1 | IS5-like element IS1381A family transposase | - |
| EGX96_RS04660 (EGX96_04660) | - | 903588..904313 (+) | 726 | Protein_890 | Fic family protein | - |
| EGX96_RS04665 (EGX96_04665) | - | 904541..905350 (+) | 810 | WP_001125681.1 | hypothetical protein | - |
| EGX96_RS04670 (EGX96_04670) | - | 905801..906472 (+) | 672 | WP_000186293.1 | PepSY domain-containing protein | - |
| EGX96_RS04675 (EGX96_04675) | - | 906557..907228 (+) | 672 | WP_000699614.1 | response regulator transcription factor | - |
| EGX96_RS04680 (EGX96_04680) | - | 907212..908576 (+) | 1365 | WP_000898853.1 | cell wall metabolism sensor histidine kinase WalK | - |
| EGX96_RS04685 (EGX96_04685) | - | 908686..910239 (-) | 1554 | WP_001114296.1 | YfcC family protein | - |
| EGX96_RS04690 (EGX96_04690) | arcC | 910333..911259 (-) | 927 | WP_001074357.1 | carbamate kinase | - |
| EGX96_RS04695 (EGX96_04695) | argF | 911271..912269 (-) | 999 | WP_000793622.1 | ornithine carbamoyltransferase | - |
| EGX96_RS04700 (EGX96_04700) | - | 912372..913667 (+) | 1296 | WP_000884296.1 | ATP-binding protein | - |
| EGX96_RS04705 (EGX96_04705) | - | 913664..914497 (+) | 834 | WP_000675241.1 | DNA-binding domain-containing protein | - |
| EGX96_RS04710 (EGX96_04710) | - | 914719..915441 (+) | 723 | WP_000622721.1 | ABC transporter ATP-binding protein | - |
| EGX96_RS04715 (EGX96_04715) | - | 915444..916958 (+) | 1515 | WP_000209288.1 | ABC transporter permease/substrate-binding protein | - |
Sequence
Protein
Download Length: 379 a.a. Molecular weight: 40917.44 Da Isoelectric Point: 5.0474
>NTDB_id=325921 EGX96_RS04515 WP_001085741.1 877621..878760(-) (recA) [Streptococcus sp. FDAARGOS_520]
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVEEKNEADDLVLDLDNAIEIEE
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVEEKNEADDLVLDLDNAIEIEE
Nucleotide
Download Length: 1140 bp
>NTDB_id=325921 EGX96_RS04515 WP_001085741.1 877621..878760(-) (recA) [Streptococcus sp. FDAARGOS_520]
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTTTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGTTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGAACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTGAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTTTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGTTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGAACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTGAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.