Detailed information NTG0322662

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EBL90_RS07130
• Genome accession: NZ_CP033214
• Coordinates: 1435362..1436408 (+)
• Length: 348 a.a.
• NCBI ID: WP_003419530.1
• Uniprot ID: A0AAX3GVV5
• Organism: Clostridioides difficile strain 12038
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1430362..1441408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EBL90_RS07115	mnmH	1432180..1433238 (+)	1059	WP_003419524.1	tRNA 2-selenouridine(34) synthase MnmH	-
EBL90_RS07120	rimO	1433232..1434566 (+)	1335	WP_003419527.1	30S ribosomal protein S12 methylthiotransferase RimO	-
EBL90_RS07125	pgsA	1434553..1435095 (+)	543	WP_009905407.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EBL90_RS07130	recA	1435362..1436408 (+)	1047	WP_003419530.1	recombinase RecA	Machinery gene
EBL90_RS07135	rny	1436584..1438125 (+)	1542	WP_003428216.1	ribonuclease Y	-
EBL90_RS07140	-	1438435..1440771 (+)	2337	WP_077744860.1	diguanylate cyclase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37387.68 Da
• Isoelectric Point: 4.8236

>NTDB_id=322662 EBL90_RS07130 WP_003419530.1 1435362..1436408(+) (recA) [Clostridioides difficile strain 12038]
MSVDQEKLKALNEALGKIEKDFGKGSVMKLGEATSMSIDVISTGAIGLDIAIGIGGLPRGRIVEVYGPESSGKTTVALSC
VASAQKDGGIAAFIDAEHALDPVYAKALGVDVDNLIISQPDTGEQALEIAEALIRSGAIDIIVIDSVAALVPKAEIDGDM
GDSHVGLQARLMSQALRKLTGSIKKSNCVAIFINQLREKVGIMFGNPETTTGGRALKFYSSVRLDVRKIDTIKQGDKVIG
SRTRVKVVKNKVAPPFKQAEFDIMYGEGISKIGDLLDIAADVDIVKKSGSWYSYNDTKLGQGRENVKKFLEDNLDLTNEI
DEKVRAFYNLNEEHEEAGNSVSKEIVEE

Nucleotide

• Length: 1047 bp

>NTDB_id=322662 EBL90_RS07130 WP_003419530.1 1435362..1436408(+) (recA) [Clostridioides difficile strain 12038]
ATGAGTGTAGATCAAGAAAAATTAAAAGCGTTGAATGAAGCTTTAGGTAAAATTGAAAAAGATTTTGGTAAAGGTTCAGT
AATGAAATTGGGAGAAGCAACATCTATGTCTATAGATGTTATATCAACAGGAGCGATTGGTTTAGATATAGCTATTGGTA
TAGGAGGTCTACCTAGAGGGAGAATAGTTGAAGTATATGGTCCAGAATCTTCTGGTAAGACTACTGTTGCACTTAGTTGT
GTAGCATCAGCTCAAAAAGATGGAGGAATAGCTGCATTTATAGATGCAGAACATGCACTTGACCCAGTATACGCAAAAGC
TTTGGGCGTGGATGTTGATAACCTAATAATATCTCAACCAGATACAGGTGAACAGGCTTTAGAGATAGCAGAGGCATTGA
TAAGAAGTGGAGCGATAGATATAATAGTAATAGACTCAGTAGCAGCATTAGTTCCAAAGGCTGAAATAGATGGAGATATG
GGTGACTCTCACGTAGGGTTACAAGCTAGACTTATGTCGCAAGCTCTTAGAAAGTTAACTGGTTCAATTAAAAAATCAAA
TTGTGTTGCTATATTTATAAACCAGTTAAGAGAGAAAGTAGGAATAATGTTTGGAAACCCAGAAACTACTACTGGAGGAC
GTGCATTAAAATTCTATTCATCAGTTAGATTGGATGTTAGAAAAATAGACACAATAAAACAAGGAGATAAAGTTATAGGT
AGTAGAACTAGAGTTAAAGTCGTTAAAAATAAAGTAGCACCTCCATTTAAGCAAGCTGAATTTGATATAATGTATGGAGA
AGGGATTTCAAAAATTGGAGACCTTCTAGATATAGCTGCTGATGTAGATATAGTAAAAAAATCAGGTTCATGGTATAGTT
ACAATGATACTAAACTTGGACAAGGAAGAGAAAATGTTAAAAAATTCTTGGAGGATAATTTAGATTTAACTAATGAAATA
GATGAGAAAGTTAGAGCATTTTACAATTTAAATGAAGAACATGAAGAAGCAGGTAATTCAGTATCAAAAGAAATTGTAGA
AGAATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	66.762	100	0.67
recA	Streptococcus mitis SK321	66.185	99.425	0.658
recA	Streptococcus mitis NCTC 12261	68.085	94.54	0.644
recA	Bacillus subtilis subsp. subtilis str. 168	69.565	92.529	0.644
recA	Streptococcus pneumoniae D39	67.173	94.54	0.635
recA	Streptococcus pneumoniae Rx1	67.173	94.54	0.635
recA	Streptococcus pneumoniae R6	67.173	94.54	0.635
recA	Streptococcus pneumoniae TIGR4	67.173	94.54	0.635
recA	Lactococcus lactis subsp. cremoris KW2	65.476	96.552	0.632
recA	Streptococcus pyogenes NZ131	66.972	93.966	0.629
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.758	94.828	0.624
recA	Latilactobacillus sakei subsp. sakei 23K	64.955	95.115	0.618
recA	Neisseria gonorrhoeae MS11	66.987	89.655	0.601
recA	Neisseria gonorrhoeae MS11	66.987	89.655	0.601
recA	Neisseria gonorrhoeae strain FA1090	66.987	89.655	0.601
recA	Acinetobacter baylyi ADP1	64.087	92.816	0.595
recA	Pseudomonas stutzeri DSM 10701	63.889	93.103	0.595
recA	Helicobacter pylori 26695	61.976	95.977	0.595
recA	Helicobacter pylori strain NCTC11637	61.976	95.977	0.595
recA	Acinetobacter baumannii D1279779	63.777	92.816	0.592
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.048	95.402	0.592
recA	Vibrio cholerae strain A1552	62.048	95.402	0.592
recA	Glaesserella parasuis strain SC1401	64.174	92.241	0.592
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.272	93.103	0.589
recA	Ralstonia pseudosolanacearum GMI1000	66.558	88.506	0.589
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.681	92.816	0.563