Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   CDG68_RS13170 Genome accession   NZ_CP033133
Coordinates   2131012..2132052 (+) Length   346 a.a.
NCBI ID   WP_087551791.1    Uniprot ID   A0A3G2T4C5
Organism   Acinetobacter wuhouensis strain WCHAW010062     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2126012..2137052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG68_RS13145 (CDG68_13150) - 2126793..2127521 (-) 729 WP_087551795.1 histidine phosphatase family protein -
  CDG68_RS13150 (CDG68_13155) - 2127631..2128482 (-) 852 WP_087551794.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  CDG68_RS13155 (CDG68_13160) - 2128724..2129662 (+) 939 WP_087551793.1 FRG domain-containing protein -
  CDG68_RS13160 (CDG68_13165) - 2129711..2130400 (+) 690 WP_087551792.1 HAD-IA family hydrolase -
  CDG68_RS13165 (CDG68_13170) - 2130384..2130824 (+) 441 WP_068974624.1 RNA-binding S4 domain-containing protein -
  CDG68_RS13170 (CDG68_13175) recA 2131012..2132052 (+) 1041 WP_087551791.1 recombinase RecA Machinery gene
  CDG68_RS13175 (CDG68_13180) - 2132276..2133130 (+) 855 WP_087551790.1 SDR family NAD(P)-dependent oxidoreductase -
  CDG68_RS13180 (CDG68_13185) - 2133148..2134590 (+) 1443 WP_087551842.1 class I adenylate-forming enzyme family protein -
  CDG68_RS13185 (CDG68_13190) - 2134687..2135373 (+) 687 WP_087551789.1 regulatory protein RecX -
  CDG68_RS13195 (CDG68_13200) - 2135929..2136789 (+) 861 WP_068974620.1 YbgF trimerization domain-containing protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37606.14 Da        Isoelectric Point: 5.3003

>NTDB_id=321655 CDG68_RS13170 WP_087551791.1 2131012..2132052(+) (recA) [Acinetobacter wuhouensis strain WCHAW010062]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TRVKVVKNKMAPPFKEALFQIMYGKGVNHLGELVDLAVAQELVHKAGAWYSYNGDKIGQGKNNVIRHLEENPQLANDLDR
MIREKLLTTAVVPEEKDEEEPEFLDV

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=321655 CDG68_RS13170 WP_087551791.1 2131012..2132052(+) (recA) [Acinetobacter wuhouensis strain WCHAW010062]
ATGGATGATAACAAAAGCAAGGCACTCAATGCTGCCCTAAGCCAAATTGAAAAACAATTTGGTAAAAATACAGTCATGCG
TTTGGGTGACAACACTGTTCAAGCCGTTGAAGCTGTATCTACAGGTTCTTTAACACTGGATATCGCACTTGGTATTGGCG
GCTTACCGAAAGGTCGTATCGTTGAAATTTACGGTCCTGAATCTTCTGGTAAAACCACAATGACTTTACAAGCCATTGCG
CAATGCCAAAAAGCAGGTGGAACTTGTGCCTTTATCGATGCTGAACATGCTTTAGATCCACAATATGCACGTAAACTAGG
TGTAGATATTGACAATCTTTTGGTATCACAGCCTGACCACGGTGAGCAAGCGCTTGAAATCGCTGACATGTTGGTTCGCT
CTGGTGCAATTGACATGATCGTTGTCGACTCTGTTGCAGCATTAACGCCAAAAGCTGAAATTGAAGGCGAAATGGGCGAC
TCGCACATGGGCTTGCAAGCACGTTTGATGAGCCAAGCATTGCGTAAAATTACAGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATCTTCATCAACCAGATCCGTATGAAGATTGGTGTGATGTTTGGTAGCCCAGAAACCACAACTGGTGGTAACGCAT
TGAAATTCTACGCTTCTGTACGTTTAGATATTCGTCGTATTGGTCAAGTTAAAGAAGGCGATGAGATCGTCGGTTCTGAA
ACACGTGTCAAAGTTGTAAAGAACAAAATGGCACCTCCGTTTAAAGAAGCTTTATTCCAAATCATGTATGGTAAAGGTGT
TAACCATCTTGGTGAATTGGTTGATCTTGCGGTTGCACAAGAATTGGTGCACAAAGCAGGCGCTTGGTATTCTTATAATG
GCGATAAAATTGGTCAAGGTAAAAACAATGTGATTCGTCACTTAGAGGAAAATCCTCAATTGGCGAATGATCTTGACCGC
ATGATTCGTGAAAAACTATTAACAACTGCTGTTGTGCCTGAAGAAAAAGATGAAGAAGAACCTGAATTCTTAGATGTTTA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G2T4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

89.08

100

0.896
  recA Acinetobacter baumannii D1279779

89.017

100

0.89
  recA Pseudomonas stutzeri DSM 10701

75.152

95.376

0.717
  recA Vibrio cholerae strain A1552

75.535

94.509

0.714
  recA Vibrio cholerae O1 biovar El Tor strain E7946

75.535

94.509

0.714
  recA Glaesserella parasuis strain SC1401

68.497

100

0.685
  recA Ralstonia pseudosolanacearum GMI1000

69.817

94.798

0.662
  recA Neisseria gonorrhoeae strain FA1090

65.994

100

0.662
  recA Neisseria gonorrhoeae MS11

65.994

100

0.662
  recA Neisseria gonorrhoeae MS11

65.994

100

0.662
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.444

95.665

0.607
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

60.933

99.133

0.604
  recA Helicobacter pylori strain NCTC11637

60.641

99.133

0.601
  recA Helicobacter pylori 26695

60.35

99.133

0.598
  recA Streptococcus pyogenes NZ131

59.026

100

0.595
  recA Streptococcus mutans UA159

59.064

98.844

0.584
  recA Streptococcus pneumoniae Rx1

61.043

94.22

0.575
  recA Streptococcus pneumoniae D39

61.043

94.22

0.575
  recA Streptococcus pneumoniae R6

61.043

94.22

0.575
  recA Streptococcus pneumoniae TIGR4

61.043

94.22

0.575
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.187

92.486

0.575
  recA Streptococcus mitis NCTC 12261

60.991

93.353

0.569
  recA Streptococcus mitis SK321

60.991

93.353

0.569
  recA Bacillus subtilis subsp. subtilis str. 168

61.059

92.775

0.566
  recA Latilactobacillus sakei subsp. sakei 23K

57.958

96.243

0.558
  recA Lactococcus lactis subsp. cremoris KW2

58.824

93.353

0.549

Multiple sequence alignment