Detailed information NTG0315548

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D4A92_RS18440
• Genome accession: NZ_CP032405
• Coordinates: 3752904..3753992 (-)
• Length: 362 a.a.
• NCBI ID: WP_006726107.1
• Uniprot ID: K2PFG1
• Organism: Rhizobium rosettiformans strain MAE2-X
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3747904..3758992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4A92_RS18430 (D4A92_18405)	-	3748707..3749900 (-)	1194	WP_246753977.1	GGDEF domain-containing protein	-
D4A92_RS18435 (D4A92_18410)	alaS	3750095..3752752 (-)	2658	WP_203016436.1	alanine--tRNA ligase	-
D4A92_RS18440 (D4A92_18415)	recA	3752904..3753992 (-)	1089	WP_006726107.1	recombinase RecA	Machinery gene
D4A92_RS18445 (D4A92_18420)	-	3754235..3755179 (+)	945	WP_203016437.1	carbohydrate kinase family protein	-
D4A92_RS18450 (D4A92_18425)	-	3755210..3756136 (+)	927	WP_006726105.1	pseudouridine-5'-phosphate glycosidase	-
D4A92_RS18455 (D4A92_18430)	-	3756222..3758846 (-)	2625	WP_203016438.1	PAS domain-containing sensor histidine kinase	-

Sequence

Protein

• Length: 362 a.a.
• Molecular weight: 38714.31 Da
• Isoelectric Point: 5.1827

>NTDB_id=315548 D4A92_RS18440 WP_006726107.1 3752904..3753992(-) (recA) [Rhizobium rosettiformans strain MAE2-X]
MAQNSLRLVEDKSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGPES
SGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAAL
TPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
AVKDREEVVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENAKLFL
RDNPAVSQEIEMALRQNAGLIAEKFLQNGGPDANDADGADDA

Nucleotide

• Length: 1089 bp

>NTDB_id=315548 D4A92_RS18440 WP_006726107.1 3752904..3753992(-) (recA) [Rhizobium rosettiformans strain MAE2-X]
ATGGCACAGAATTCTTTGCGGCTGGTAGAGGACAAATCGGTGGATAAAAGCAAGGCATTGGAAGCGGCGCTCTCGCAGAT
CGAACGGTCGTTCGGCAAGGGCTCGATCATGAAACTCGGCGCGAACGAGAGCGTGGTCGAAGTCGAGACGGTCTCGACGG
GGTCGCTCAGCCTCGACATCGCGCTCGGCATTGGCGGCCTGCCGAAGGGGCGCATCATTGAAATTTACGGGCCTGAAAGC
TCGGGTAAGACGACGCTTGCGCTGCAGACCATTGCCGAAGCGCAGAAGAAGGGCGGCATCTGCGCCTTCGTCGACGCCGA
ACATGCCCTTGATCCGGTCTATGCCCGCAAGCTCGGCGTCGATCTGCAGAACCTTCTGATCTCGCAGCCGGATACAGGCG
AGCAGGCACTCGAAATCACCGACACGCTGGTGCGCTCGGGCGCGATCGACGTGCTCGTTGTCGACTCCGTTGCAGCGCTC
ACCCCGCGCGCCGAAATCGAAGGCGAAATGGGCGACAGCCTGCCGGGCATGCAGGCCCGCCTGATGAGCCAGGCGCTGCG
CAAGCTGACCGCCTCGATCTCCAAGTCGAAGACGATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGCTCGCCGGAAACGACGACCGGCGGTAACGCTCTGAAGTTCTACGCCTCCGTGCGTCTCGACATTCGCCGCATCGGC
GCGGTCAAGGATCGCGAAGAGGTCGTCGGTAACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCACCGCCCTTCAA
GCAGGTGGAATTCGACATCATGTATGGCGAAGGCGTCTCGAAGACCGGTGAGCTCGTCGATCTCGGCGTCAAGGCCGGCA
TCGTCGAGAAGTCCGGGGCCTGGTTCTCCTACAACAGCCAGCGTCTTGGCCAGGGGCGTGAAAACGCCAAGCTCTTCCTG
CGCGACAATCCTGCCGTCTCCCAGGAAATCGAGATGGCACTGCGCCAGAATGCCGGTCTGATCGCCGAGAAGTTCCTGCA
GAATGGCGGGCCCGACGCGAATGACGCTGATGGTGCCGACGACGCGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

3D structure

• AlphaFold DB: K2PFG1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	66.957	95.304	0.638
recA	Neisseria gonorrhoeae MS11	66.957	95.304	0.638
recA	Neisseria gonorrhoeae strain FA1090	66.957	95.304	0.638
recA	Acinetobacter baylyi ADP1	71.739	88.95	0.638
recA	Acinetobacter baumannii D1279779	71.429	88.95	0.635
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.358	92.541	0.633
recA	Vibrio cholerae strain A1552	68.358	92.541	0.633
recA	Pseudomonas stutzeri DSM 10701	65.896	95.58	0.63
recA	Glaesserella parasuis strain SC1401	66.471	93.923	0.624
recA	Ralstonia pseudosolanacearum GMI1000	71.019	86.74	0.616
recA	Bacillus subtilis subsp. subtilis str. 168	65.644	90.055	0.591
recA	Helicobacter pylori strain NCTC11637	65.031	90.055	0.586
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.832	90.331	0.586
recA	Helicobacter pylori 26695	64.724	90.055	0.583
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.526	90.331	0.583
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	65.615	87.569	0.575
recA	Streptococcus mitis SK321	61.934	91.436	0.566
recA	Latilactobacillus sakei subsp. sakei 23K	62.385	90.331	0.564
recA	Streptococcus mitis NCTC 12261	61.631	91.436	0.564
recA	Streptococcus pneumoniae R6	61.329	91.436	0.561
recA	Streptococcus pneumoniae Rx1	61.329	91.436	0.561
recA	Streptococcus pneumoniae D39	61.329	91.436	0.561
recA	Streptococcus pneumoniae TIGR4	61.329	91.436	0.561
recA	Streptococcus mutans UA159	59.76	91.989	0.55
recA	Lactococcus lactis subsp. cremoris KW2	59.403	92.541	0.55
recA	Streptococcus pyogenes NZ131	60.486	90.884	0.55