Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   BEN74_RS02890 Genome accession   NZ_CP032279
Coordinates   318393..319439 (+) Length   348 a.a.
NCBI ID   WP_068908986.1    Uniprot ID   A0A3B7PN28
Organism   Acinetobacter sp. WCHAc010034     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 313393..324439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS02865 (BEN74_02860) - 314984..315424 (+) 441 WP_068908976.1 hypothetical protein -
  BEN74_RS02870 (BEN74_02865) - 315470..316207 (-) 738 WP_068908979.1 histidine phosphatase family protein -
  BEN74_RS02875 (BEN74_02870) - 316262..317113 (-) 852 WP_068908981.1 3'(2'),5'-bisphosphate nucleotidase CysQ family protein -
  BEN74_RS02880 (BEN74_02875) - 317128..317814 (+) 687 WP_068908983.1 HAD-IA family hydrolase -
  BEN74_RS02885 (BEN74_02880) - 317807..318247 (+) 441 WP_068908985.1 RNA-binding S4 domain-containing protein -
  BEN74_RS02890 (BEN74_02885) recA 318393..319439 (+) 1047 WP_068908986.1 recombinase RecA Machinery gene
  BEN74_RS02895 (BEN74_02890) - 319509..320117 (+) 609 WP_068908988.1 regulatory protein RecX -
  BEN74_RS02905 (BEN74_02900) - 320592..321452 (+) 861 WP_068908990.1 YbgF trimerization domain-containing protein -
  BEN74_RS02910 (BEN74_02905) lpxA 321505..322293 (-) 789 WP_068908993.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  BEN74_RS02915 (BEN74_02910) fabZ 322290..322775 (-) 486 WP_068909080.1 3-hydroxyacyl-ACP dehydratase FabZ -
  BEN74_RS02920 (BEN74_02915) lpxD 322781..323848 (-) 1068 WP_068908995.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  BEN74_RS02925 (BEN74_02920) - 323852..324349 (-) 498 WP_068908997.1 OmpH family outer membrane protein -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 37723.08 Da        Isoelectric Point: 5.1500

>NTDB_id=314691 BEN74_RS02890 WP_068908986.1 318393..319439(+) (recA) [Acinetobacter sp. WCHAc010034]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTAQAVEAISTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGNKIGQGKNNTIRHLEEHPELAQTIEK
LIRDQLLTTGNAAPAEEKDEEEPDFLDA

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=314691 BEN74_RS02890 WP_068908986.1 318393..319439(+) (recA) [Acinetobacter sp. WCHAc010034]
ATGGATGATAATAAAAGCAAGGCGCTGAATGCTGCCCTGAGCCAAATTGAAAAGCAGTTTGGCAAGAATACTGTAATGCG
CCTTGGCGACAACACCGCGCAGGCCGTGGAAGCCATATCTACCGGTTCTTTAACCCTGGATATCGCACTCGGCATTGGCG
GTTTGCCTAAAGGCCGCATCGTTGAAATTTACGGCCCTGAATCTTCAGGTAAAACCACCATGACGCTGCAGGCGATTGCG
CAATGCCAGAAAACCGGCGGCACCTGCGCATTCATCGATGCGGAACATGCGCTGGACCCTCAATATGCGCGCAAGCTGGG
CGTAGACATTGACAACCTTTTAGTTTCCCAGCCCGACAACGGCGAACAGGCTTTAGAAATTGCCGACATGCTGGTGCGTT
CCGGCGCAATTGACATGATCGTTGTCGACTCCGTGGCGGCGCTTACCCCGCGCGCTGAAATTGAAGGCGAAATGGGCGAC
TCGCACATGGGCCTGCAGGCGCGCCTGATGAGCCAGGCATTGCGTAAAATCACCGGTAACGCCAAACGCTCCAACTGCAT
GGTGATCTTCATTAACCAGATCCGCATGAAGATTGGCGTCATGTTCGGCAGCCCGGAAACCACTACTGGCGGTAACGCGC
TGAAGTTCTATGCCTCTGTGCGCCTGGATATCCGCCGTATCGGCCAGGTGAAGGAAGGCGATGAAATTGTCGGCTCCGAA
ACCAAAGTTAAAGTTGTGAAAAACAAAATGGCGCCTCCATTCCGTGAAGCGCTGTTCCAAATCCTTTACGGCAAAGGCGT
GAACCACTTAGGCGAGCTGGTTGATCTTGCGGTGCAGCAGGAAATTGTGCAGAAAGCCGGCGCCTGGTATTCATATCAGG
GCAACAAGATTGGCCAAGGTAAAAACAATACCATCCGCCATCTTGAAGAGCACCCTGAGCTGGCGCAGACCATTGAAAAA
CTGATCCGTGACCAGCTGCTGACCACCGGCAATGCTGCGCCGGCGGAAGAGAAAGACGAGGAAGAGCCAGATTTTCTGGA
TGCTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7PN28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

89.685

100

0.899
  recA Acinetobacter baumannii D1279779

90.173

99.425

0.897
  recA Pseudomonas stutzeri DSM 10701

74.706

97.701

0.73
  recA Vibrio cholerae strain A1552

73.414

95.115

0.698
  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.414

95.115

0.698
  recA Glaesserella parasuis strain SC1401

69.006

98.276

0.678
  recA Ralstonia pseudosolanacearum GMI1000

69.817

94.253

0.658
  recA Neisseria gonorrhoeae MS11

68.827

93.103

0.641
  recA Neisseria gonorrhoeae MS11

68.827

93.103

0.641
  recA Neisseria gonorrhoeae strain FA1090

68.827

93.103

0.641
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.808

98.563

0.609
  recA Helicobacter pylori strain NCTC11637

60.933

98.563

0.601
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.142

95.115

0.601
  recA Helicobacter pylori 26695

60.641

98.563

0.598
  recA Streptococcus mutans UA159

59.195

100

0.592
  recA Streptococcus mitis SK321

60.117

97.989

0.589
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.963

93.103

0.586
  recA Streptococcus mitis NCTC 12261

59.824

97.989

0.586
  recA Streptococcus pneumoniae Rx1

61.963

93.678

0.58
  recA Streptococcus pneumoniae D39

61.963

93.678

0.58
  recA Streptococcus pneumoniae R6

61.963

93.678

0.58
  recA Streptococcus pneumoniae TIGR4

61.963

93.678

0.58
  recA Streptococcus pyogenes NZ131

61.538

93.391

0.575
  recA Bacillus subtilis subsp. subtilis str. 168

60.87

92.529

0.563
  recA Latilactobacillus sakei subsp. sakei 23K

58.567

92.241

0.54
  recA Lactococcus lactis subsp. cremoris KW2

58.204

92.816

0.54

Multiple sequence alignment