Detailed information NTG0313767

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BAR1_RS06595
• Genome accession: NZ_CP032125
• Coordinates: 1318653..1319726 (+)
• Length: 357 a.a.
• NCBI ID: WP_118942284.1
• Uniprot ID: A0A347UFJ9
• Organism: Profundibacter amoris strain BAR1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1313653..1324726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAR1_RS06585 (BAR1_06585)	-	1314803..1315960 (+)	1158	WP_118942283.1	RsmB/NOP family class I SAM-dependent RNA methyltransferase	-
BAR1_RS06590 (BAR1_06590)	-	1316226..1318376 (+)	2151	WP_118944376.1	ATP-binding protein	-
BAR1_RS06595 (BAR1_06595)	recA	1318653..1319726 (+)	1074	WP_118942284.1	recombinase RecA	Machinery gene
BAR1_RS06600 (BAR1_06600)	alaS	1319853..1322516 (+)	2664	WP_118942285.1	alanine--tRNA ligase	-
BAR1_RS06605 (BAR1_06605)	-	1322520..1322804 (+)	285	WP_118942286.1	DUF1330 domain-containing protein	-
BAR1_RS06610 (BAR1_06610)	-	1323301..1324197 (-)	897	WP_118942287.1	hypothetical protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38400.83 Da
• Isoelectric Point: 5.0748

>NTDB_id=313767 BAR1_RS06595 WP_118942284.1 1318653..1319726(+) (recA) [Profundibacter amoris strain BAR1]
MATADLLKMADKRDTDKQKALDSALAQIERQFGKGSIMKLGQEGAVQEIEATSTGSLGLDIALGIGGIPKGRVVEIYGPE
SSGKTTLTLHCIAEAQKKGGVCAFVDAEHALDPLYAKNLGVNTDELLISQPDTGEQALEITDTLVRSGAVSMVVVDSVAA
LTPKSELEGDMGDASVGVHARLMSQAMRKLTSSISRSGCTVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GALKDRDEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGIVDKSGSWYSYGDERIGQGRENAKTY
LKEHQRIAYEIEDKIRAAHGLDFEMPEISEDGDVLEA

Nucleotide

• Length: 1074 bp

>NTDB_id=313767 BAR1_RS06595 WP_118942284.1 1318653..1319726(+) (recA) [Profundibacter amoris strain BAR1]
ATGGCAACGGCAGATTTATTGAAAATGGCAGACAAGCGCGACACCGACAAACAAAAGGCGCTGGATTCAGCGCTGGCCCA
GATTGAACGCCAATTTGGCAAAGGCTCGATCATGAAACTGGGTCAGGAGGGCGCGGTTCAGGAAATCGAGGCCACCTCGA
CGGGTTCACTGGGGCTTGATATTGCCCTTGGGATTGGCGGCATTCCCAAAGGGCGGGTGGTCGAAATCTATGGGCCGGAA
TCTTCGGGCAAAACCACCTTAACTTTGCATTGCATTGCCGAAGCCCAGAAAAAGGGCGGGGTTTGCGCTTTCGTTGATGC
GGAACATGCGCTGGACCCGCTTTATGCAAAAAACCTGGGTGTGAACACGGATGAATTGCTGATCTCACAACCAGATACGG
GTGAGCAGGCGCTGGAAATCACCGACACGCTGGTGCGTTCAGGGGCCGTTAGCATGGTGGTGGTCGATTCAGTTGCCGCG
CTGACACCCAAATCCGAACTGGAAGGCGACATGGGCGATGCCAGTGTTGGCGTCCATGCCCGCTTGATGAGCCAGGCGAT
GCGTAAACTGACCAGCTCGATCTCGCGATCCGGTTGCACGGTTATTTTCATCAACCAGATCCGCATGAAAATCGGCGTGA
TGTTCGGCAGCCCCGAAACCACGACGGGCGGCAATGCGCTGAAATTCTATTCCTCGGTGCGTCTGGATATCCGCCGGATT
GGCGCCCTGAAGGACCGTGATGAAATTGTTGGCAACGCCACCCGCGTGAAAGTTGTTAAAAACAAGGTGGCACCGCCGTT
CAAACAGGTAGAATTCGACATCATGTATGGCGAAGGCATCTCCAAGATGGGCGAATTGCTGGACCTCGGGGTGAAAGCCG
GCATCGTTGACAAATCCGGTTCCTGGTATTCCTACGGGGATGAGCGCATCGGGCAGGGGCGCGAAAATGCCAAGACCTAT
CTGAAAGAACACCAGCGCATCGCCTATGAGATCGAGGATAAAATCCGCGCCGCCCATGGGCTTGATTTCGAGATGCCGGA
AATTTCCGAAGACGGGGACGTTCTGGAAGCGTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (19-281)

3D structure

• AlphaFold DB: A0A347UFJ9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	71.25	89.636	0.639
recA	Pseudomonas stutzeri DSM 10701	69.753	90.756	0.633
recA	Neisseria gonorrhoeae MS11	66.964	94.118	0.63
recA	Neisseria gonorrhoeae MS11	66.964	94.118	0.63
recA	Neisseria gonorrhoeae strain FA1090	66.964	94.118	0.63
recA	Acinetobacter baylyi ADP1	64.368	97.479	0.627
recA	Helicobacter pylori strain NCTC11637	66.269	93.838	0.622
recA	Helicobacter pylori 26695	65.672	93.838	0.616
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.111	90.476	0.616
recA	Vibrio cholerae strain A1552	68.111	90.476	0.616
recA	Acinetobacter baumannii D1279779	67.802	90.476	0.613
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.061	92.437	0.611
recA	Ralstonia pseudosolanacearum GMI1000	69.427	87.955	0.611
recA	Bacillus subtilis subsp. subtilis str. 168	66.463	91.877	0.611
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.951	91.317	0.602
recA	Streptococcus pneumoniae R6	60.458	97.759	0.591
recA	Streptococcus pneumoniae Rx1	60.458	97.759	0.591
recA	Streptococcus pneumoniae D39	60.458	97.759	0.591
recA	Streptococcus pneumoniae TIGR4	60.458	97.759	0.591
recA	Lactococcus lactis subsp. cremoris KW2	62.5	94.118	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	61.747	92.997	0.574
recA	Streptococcus mitis NCTC 12261	60.294	95.238	0.574
recA	Streptococcus mitis SK321	60	95.238	0.571
recA	Streptococcus mutans UA159	60	92.437	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.111	90.756	0.555
recA	Streptococcus pyogenes NZ131	59.878	92.157	0.552