Detailed information NTG0312874

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D1820_RS03615
• Genome accession: NZ_CP031956
• Coordinates: 741340..742407 (+)
• Length: 355 a.a.
• NCBI ID: WP_096789140.1
• Uniprot ID: A0AAN1GQR3
• Organism: Phaeobacter sp. LSS9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 736340..747407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1820_RS03600 (D1820_03600)	-	736858..738069 (+)	1212	WP_118067907.1	RsmB/NOP family class I SAM-dependent RNA methyltransferase	-
D1820_RS03605 (D1820_03605)	-	738164..740479 (+)	2316	WP_096871276.1	ATP-binding protein	-
D1820_RS03610 (D1820_03610)	-	740542..741135 (-)	594	WP_118067908.1	gamma-glutamyl kinase	-
D1820_RS03615 (D1820_03615)	recA	741340..742407 (+)	1068	WP_096789140.1	recombinase RecA	Machinery gene
D1820_RS03620 (D1820_03620)	alaS	742622..745273 (+)	2652	WP_118067909.1	alanine--tRNA ligase	-
D1820_RS03625 (D1820_03625)	-	745368..745655 (+)	288	WP_040169075.1	DUF1330 domain-containing protein	-
D1820_RS03630 (D1820_03630)	-	745747..746328 (-)	582	WP_118067910.1	VOC family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38081.44 Da
• Isoelectric Point: 4.8742

>NTDB_id=312874 D1820_RS03615 WP_096789140.1 741340..742407(+) (recA) [Phaeobacter sp. LSS9]
MADLLTMKDNKKSGDKQKALDSALAQIERQFGKGSIMKLGDGNPLNEIEASSTGSLGLDIALGIGGLPMGRIVEIYGPES
SGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAAKLGVDLDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAAL
TPKSELEGDMGDSNVGVQARLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIG
AIKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVAAGVVAKSGAWFSYGDERIGQGRENAKTYL
RENAHIAFDIEDKIRAAHGLEFDRPEGADDDILEA

Nucleotide

• Length: 1068 bp

>NTDB_id=312874 D1820_RS03615 WP_096789140.1 741340..742407(+) (recA) [Phaeobacter sp. LSS9]
ATGGCGGATCTTTTGACCATGAAAGACAATAAGAAGAGCGGCGACAAACAAAAGGCGCTTGATAGCGCTCTGGCGCAGAT
TGAGCGGCAGTTCGGCAAGGGCTCCATTATGAAGCTCGGTGACGGCAACCCCCTGAACGAGATCGAGGCGTCGTCGACCG
GATCGTTGGGGCTGGATATCGCCCTTGGCATCGGCGGTTTGCCGATGGGGCGTATCGTCGAAATCTACGGCCCTGAAAGC
TCGGGCAAGACCACGCTGACCCTGCATTGTATTGCAGAGCAGCAGAAGAAAGGTGGCGTTTGCGCCTTTGTGGATGCGGA
ACATGCGCTTGATCCGCAGTATGCGGCCAAGCTGGGTGTCGATCTGGACGAGCTGCTGATTTCACAGCCCGATACCGGTG
AGCAGGCCCTGGAGATCACCGATACGCTGGTGCGCTCCGGCGCAGTGAATATGGTGATTGTGGACTCCGTTGCAGCCCTC
ACACCAAAGTCGGAGCTGGAAGGCGACATGGGCGACAGCAATGTCGGCGTGCAGGCCCGTTTGATGAGCCAGGCCATGCG
CAAACTGACTGGCTCCATCAGCCGTTCCAACTGCATGGTGATTTTCATCAACCAGATCCGGATGAAGATTGGCGTCATGT
TCGGCTCACCCGAAACCACAACAGGCGGCAACGCGTTGAAATTCTACTCCTCCGTCCGTCTGGATATCCGCCGCATTGGC
GCGATCAAGGACCGGGACGAGGTTGTCGGCAACGCAACCCGCGTGAAGGTCGTCAAGAACAAGGTGGCCCCACCGTTCAA
ACAGGTTGAATTCGACATCATGTATGGTGAAGGCATCTCCAAGATGGGCGAACTGCTGGATCTGGGTGTGGCCGCAGGTG
TTGTCGCGAAATCCGGGGCTTGGTTCTCCTACGGGGATGAGCGTATCGGGCAGGGACGTGAAAATGCCAAAACCTATCTG
CGCGAAAACGCCCATATCGCCTTTGATATCGAAGATAAGATCCGCGCGGCTCATGGGCTTGAGTTTGACCGGCCGGAAGG
TGCGGATGATGACATCCTGGAAGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	70.71	95.211	0.673
recA	Glaesserella parasuis strain SC1401	69.795	96.056	0.67
recA	Neisseria gonorrhoeae strain FA1090	68.732	95.493	0.656
recA	Neisseria gonorrhoeae MS11	68.732	95.493	0.656
recA	Neisseria gonorrhoeae MS11	68.732	95.493	0.656
recA	Pseudomonas stutzeri DSM 10701	71.118	90.704	0.645
recA	Vibrio cholerae strain A1552	70.093	90.423	0.634
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.093	90.423	0.634
recA	Acinetobacter baumannii D1279779	69.782	90.423	0.631
recA	Acinetobacter baylyi ADP1	69.47	90.423	0.628
recA	Bacillus subtilis subsp. subtilis str. 168	66.361	92.113	0.611
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.988	94.648	0.606
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.644	91.831	0.603
recA	Helicobacter pylori strain NCTC11637	65.337	91.831	0.6
recA	Helicobacter pylori 26695	64.724	91.831	0.594
recA	Streptococcus mitis NCTC 12261	60.417	94.648	0.572
recA	Streptococcus pneumoniae Rx1	60.417	94.648	0.572
recA	Streptococcus pneumoniae D39	60.417	94.648	0.572
recA	Streptococcus pneumoniae R6	60.417	94.648	0.572
recA	Streptococcus pneumoniae TIGR4	60.417	94.648	0.572
recA	Latilactobacillus sakei subsp. sakei 23K	59.357	96.338	0.572
recA	Streptococcus mitis SK321	60.119	94.648	0.569
recA	Lactococcus lactis subsp. cremoris KW2	60.18	94.085	0.566
recA	Streptococcus mutans UA159	59.821	94.648	0.566
recA	Streptococcus pyogenes NZ131	59.104	94.366	0.558
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.951	91.268	0.538