Detailed information NTG0310965

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D0Y85_RS07910
• Genome accession: NZ_CP031741
• Coordinates: 1666055..1667092 (+)
• Length: 345 a.a.
• NCBI ID: WP_117310083.1
• Uniprot ID: -
• Organism: Stenotrophomonas sp. G4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1661055..1672092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0Y85_RS07885	hfq	1661152..1661427 (+)	276	WP_025878916.1	RNA chaperone Hfq	-
D0Y85_RS07890	hflX	1661442..1662752 (+)	1311	WP_117310080.1	ribosome rescue GTPase HflX	-
D0Y85_RS07895	-	1662849..1663343 (+)	495	WP_117310081.1	CinA family protein	-
D0Y85_RS07900	ubiB	1663379..1665061 (+)	1683	WP_117310082.1	2-polyprenylphenol 6-hydroxylase	-
D0Y85_RS07905	lexA	1665217..1665852 (+)	636	WP_025878920.1	transcriptional repressor LexA	-
D0Y85_RS07910	recA	1666055..1667092 (+)	1038	WP_117310083.1	recombinase RecA	Machinery gene
D0Y85_RS07915	recX	1667203..1667694 (+)	492	WP_025878922.1	recombination regulator RecX	-
D0Y85_RS07920	alaS	1667800..1670448 (+)	2649	WP_117310084.1	alanine--tRNA ligase	-
D0Y85_RS07925	csrA	1670597..1670800 (+)	204	WP_025878924.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37215.74 Da
• Isoelectric Point: 4.7736

>NTDB_id=310965 D0Y85_RS07910 WP_117310083.1 1666055..1667092(+) (recA) [Stenotrophomonas sp. G4]
MDENKKRALAAALGQIEKQFGKGSVMRMGDRVVEPVEAIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKLGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDILVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVITEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGEERIGQGKDNARGYLRDNPQVAAKL
EAELREKFQPTEAVREEGEDEGDDE

Nucleotide

• Length: 1038 bp

>NTDB_id=310965 D0Y85_RS07910 WP_117310083.1 1666055..1667092(+) (recA) [Stenotrophomonas sp. G4]
ATGGACGAGAACAAGAAGCGCGCCCTCGCTGCAGCTCTGGGCCAGATCGAAAAGCAGTTCGGCAAGGGCTCGGTGATGCG
CATGGGCGACCGCGTGGTCGAGCCCGTCGAGGCGATCCCGACCGGTTCTCTGATGCTGGATATCGCATTGGGCATTGGTG
GCCTGCCCAAGGGCCGCGTGGTGGAAATCTACGGTCCGGAATCCTCCGGCAAGACCACGTTGACCCTGCAGGCCATCGCC
GAGTGCCAGAAGCTGGGTGGCACCGCCGCCTTCATCGATGCCGAGCACGCGCTGGACCCGATCTACGCAGGCAAGCTGGG
CGTCAATGTCGACGATCTGCTGCTGTCGCAGCCGGATACCGGTGAGCAGGCGCTTGAAATCGCCGACATGCTGGTGCGCT
CTGGCTCGGTGGACATCCTGGTGGTCGACTCGGTCGCCGCGTTGACCCCCAAGGCCGAAATCGAAGGCGAGATGGGTGAC
CAGCTGCCGGGCCTGCAGGCGCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGGCAACATCAAGCGTTCCAACACGCT
GGTGATCTTCATCAACCAGCTGCGCATGAAGATCGGAGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTATGCCTCGGTGCGCCTGGACATCCGCCGTATCGGCGCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTCGTCAAGAACAAGCTGGCGCCGCCATTCAAGCAGGTCATCACCGAGATCCTGTACGGCGA
AGGCATCAGCCGCGAGGGCGAACTGATCGATATGGGCGTCGAGGCCAAGCTGGTCGAGAAGGCCGGCGCCTGGTACAGCT
ACGGTGAAGAGCGCATCGGCCAGGGCAAGGACAACGCCCGTGGCTATCTGCGCGACAACCCGCAGGTTGCCGCCAAGCTT
GAGGCTGAGCTGCGCGAGAAGTTCCAGCCGACCGAAGCCGTCCGTGAGGAAGGCGAAGACGAAGGCGACGACGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baumannii D1279779	70.809	100	0.71
recA	Acinetobacter baylyi ADP1	70.435	100	0.704
recA	Pseudomonas stutzeri DSM 10701	72.673	96.522	0.701
recA	Ralstonia pseudosolanacearum GMI1000	76.582	91.594	0.701
recA	Vibrio cholerae strain A1552	72.086	94.493	0.681
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.086	94.493	0.681
recA	Neisseria gonorrhoeae MS11	65.607	100	0.658
recA	Neisseria gonorrhoeae MS11	65.607	100	0.658
recA	Neisseria gonorrhoeae strain FA1090	65.607	100	0.658
recA	Glaesserella parasuis strain SC1401	65.116	99.71	0.649
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.473	96.812	0.614
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.047	99.71	0.609
recA	Latilactobacillus sakei subsp. sakei 23K	63.497	94.493	0.6
recA	Bacillus subtilis subsp. subtilis str. 168	63.077	94.203	0.594
recA	Helicobacter pylori strain NCTC11637	61.078	96.812	0.591
recA	Helicobacter pylori 26695	60.479	96.812	0.586
recA	Streptococcus mitis SK321	60.671	95.072	0.577
recA	Streptococcus pyogenes NZ131	60	95.652	0.574
recA	Streptococcus mutans UA159	59.697	95.652	0.571
recA	Streptococcus pneumoniae Rx1	60.061	95.072	0.571
recA	Streptococcus pneumoniae D39	60.061	95.072	0.571
recA	Streptococcus pneumoniae R6	60.061	95.072	0.571
recA	Streptococcus pneumoniae TIGR4	60.061	95.072	0.571
recA	Streptococcus mitis NCTC 12261	60.061	95.072	0.571
recA	Lactococcus lactis subsp. cremoris KW2	59.077	94.203	0.557
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.975	94.493	0.548