Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   BEN71_RS09245 Genome accession   NZ_CP031716
Coordinates   1821501..1822541 (-) Length   346 a.a.
NCBI ID   WP_068974623.1    Uniprot ID   A0A385C4N2
Organism   Acinetobacter wuhouensis strain WCHA60     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1816501..1827541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN71_RS09220 (BEN71_09220) - 1816763..1817623 (-) 861 WP_068974620.1 YbgF trimerization domain-containing protein -
  BEN71_RS09230 (BEN71_09230) - 1818178..1818864 (-) 687 WP_068974621.1 regulatory protein RecX -
  BEN71_RS09235 (BEN71_09235) - 1818962..1820404 (-) 1443 WP_068974661.1 class I adenylate-forming enzyme family protein -
  BEN71_RS09240 (BEN71_09240) - 1820422..1821276 (-) 855 WP_068974622.1 SDR family oxidoreductase -
  BEN71_RS09245 (BEN71_09245) recA 1821501..1822541 (-) 1041 WP_068974623.1 recombinase RecA Machinery gene
  BEN71_RS09250 (BEN71_09250) - 1822729..1823169 (-) 441 WP_068974624.1 RNA-binding S4 domain-containing protein -
  BEN71_RS09255 (BEN71_09255) - 1823153..1823839 (-) 687 WP_068974625.1 HAD-IA family hydrolase -
  BEN71_RS09260 (BEN71_09260) - 1824034..1824885 (+) 852 WP_068974626.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  BEN71_RS09265 (BEN71_09265) - 1824992..1825729 (+) 738 WP_068974627.1 histidine phosphatase family protein -
  BEN71_RS09270 (BEN71_09270) - 1825926..1826450 (-) 525 WP_068974662.1 protein tyrosine phosphatase family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37610.13 Da        Isoelectric Point: 5.3003

>NTDB_id=310683 BEN71_RS09245 WP_068974623.1 1821501..1822541(-) (recA) [Acinetobacter wuhouensis strain WCHA60]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TRVKVVKNKMAPPFKEALFQIMYGKGVNHLGELVDLAVAQELVHKAGAWYSYNGDKIGQGKNNVIRHLEENPQLANDLDR
MIREKLLTTAVVTEEKDEEEPEFLDV

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=310683 BEN71_RS09245 WP_068974623.1 1821501..1822541(-) (recA) [Acinetobacter wuhouensis strain WCHA60]
ATGGATGATAACAAAAGCAAGGCACTCAATGCTGCCCTAAGCCAAATTGAAAAACAATTTGGTAAAAATACAGTCATGCG
TTTGGGTGACAACACTGTTCAAGCGGTAGAAGCTGTATCTACAGGTTCTTTAACACTGGATATCGCACTTGGTATTGGCG
GTTTACCGAAAGGTCGTATCGTTGAAATTTACGGCCCTGAATCTTCTGGTAAAACCACAATGACTTTACAAGCCATTGCG
CAATGCCAAAAAGCAGGTGGAACTTGTGCCTTTATCGATGCTGAACATGCTTTAGATCCACAATATGCACGTAAATTGGG
TGTAGATATTGACAATCTTTTGGTATCACAGCCTGACCATGGTGAGCAAGCGCTTGAAATCGCTGACATGCTTGTTCGTT
CAGGTGCCATTGACATGATCGTTGTCGACTCAGTTGCAGCATTAACGCCAAAAGCCGAAATTGAAGGTGAAATGGGCGAC
TCGCACATGGGCTTACAAGCACGTTTGATGAGCCAAGCATTGCGTAAAATCACAGGTAATGCAAAGCGTTCAAACTGTAT
GGTGATCTTCATTAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAGCCCAGAAACCACAACTGGTGGTAACGCAT
TGAAGTTCTACGCGTCTGTACGTCTTGATATTCGCCGTATTGGTCAAGTGAAAGAAGGCGATGAGATCGTCGGTTCTGAA
ACACGTGTCAAAGTTGTGAAGAACAAAATGGCACCTCCATTTAAAGAAGCTTTGTTCCAAATCATGTATGGTAAAGGTGT
TAACCATCTTGGTGAGTTGGTTGATCTTGCTGTTGCACAAGAATTAGTTCACAAAGCAGGTGCTTGGTATTCTTATAATG
GCGATAAAATTGGTCAAGGTAAAAACAATGTGATTCGTCACTTAGAGGAAAATCCTCAATTGGCGAATGATCTTGACCGC
ATGATTCGTGAAAAACTATTAACAACTGCTGTTGTGACTGAAGAAAAAGATGAAGAAGAACCTGAATTCTTAGATGTTTA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A385C4N2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

89.08

100

0.896
  recA Acinetobacter baumannii D1279779

89.017

100

0.89
  recA Pseudomonas stutzeri DSM 10701

74.551

96.532

0.72
  recA Vibrio cholerae strain A1552

75.535

94.509

0.714
  recA Vibrio cholerae O1 biovar El Tor strain E7946

75.535

94.509

0.714
  recA Glaesserella parasuis strain SC1401

68.497

100

0.685
  recA Ralstonia pseudosolanacearum GMI1000

69.817

94.798

0.662
  recA Neisseria gonorrhoeae MS11

65.994

100

0.662
  recA Neisseria gonorrhoeae MS11

65.994

100

0.662
  recA Neisseria gonorrhoeae strain FA1090

65.994

100

0.662
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.444

95.665

0.607
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

60.933

99.133

0.604
  recA Streptococcus pyogenes NZ131

59.026

100

0.595
  recA Helicobacter pylori strain NCTC11637

60.767

97.977

0.595
  recA Helicobacter pylori 26695

60.472

97.977

0.592
  recA Streptococcus mutans UA159

59.064

98.844

0.584
  recA Streptococcus pneumoniae R6

61.043

94.22

0.575
  recA Streptococcus pneumoniae Rx1

61.043

94.22

0.575
  recA Streptococcus pneumoniae D39

61.043

94.22

0.575
  recA Streptococcus pneumoniae TIGR4

61.043

94.22

0.575
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.187

92.486

0.575
  recA Streptococcus mitis NCTC 12261

60.991

93.353

0.569
  recA Streptococcus mitis SK321

60.991

93.353

0.569
  recA Bacillus subtilis subsp. subtilis str. 168

61.059

92.775

0.566
  recA Latilactobacillus sakei subsp. sakei 23K

56.105

99.422

0.558
  recA Lactococcus lactis subsp. cremoris KW2

58.824

93.353

0.549

Multiple sequence alignment