Detailed information NTG0030396

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HSM_RS01615
• Genome accession: NC_010519
• Coordinates: 338739..339806 (-)
• Length: 355 a.a.
• NCBI ID: WP_012341176.1
• Uniprot ID: -
• Organism: Histophilus somni 2336
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 333739..344806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HSM_RS01600 (HSM_0311)	-	334135..336211 (-)	2077	Protein_312	TonB-dependent receptor domain-containing protein	-
HSM_RS01605 (HSM_0313)	proS	336349..338064 (-)	1716	WP_012341174.1	proline--tRNA ligase	-
HSM_RS01610 (HSM_0314)	recX	338166..338630 (-)	465	WP_012341175.1	recombination regulator RecX	-
HSM_RS01615 (HSM_0315)	recA	338739..339806 (-)	1068	WP_012341176.1	recombinase RecA	Machinery gene
HSM_RS01620 (HSM_0316)	-	339930..341849 (-)	1920	WP_012341177.1	ABC transporter ATP-binding protein	-
HSM_RS01625 (HSM_0317)	-	342092..342724 (-)	633	WP_012341178.1	FKBP-type peptidyl-prolyl cis-trans isomerase	-
HSM_RS01630 (HSM_0318)	asd	342751..343635 (-)	885	WP_012341179.1	archaetidylserine decarboxylase	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38106.78 Da
• Isoelectric Point: 5.0731

>NTDB_id=30396 HSM_RS01615 WP_012341176.1 338739..339806(-) (recA) [Histophilus somni 2336]
MATPEEKAKALEAALGQIEKQFGKGAIMKLGETQKLDIEAISTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELLISQPDNGEQALEICDALVRSGAVDVVIVDSVAALTPKAEIEGEM
GDTHVGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVVFGNPETTTGGNALKFYASVRLDIRRVGSIKNGDEVIG
NETRVKVVKNKVAPPFRQVDFQILYGEGISRNGELIELGVKHKLVNKSGAWFSYEGEKIGQGKTNAMKWLAEHPEQAAIL
EQKLRSELLANPEKALLADLEAESESNISEVESDF

Nucleotide

• Length: 1068 bp

>NTDB_id=30396 HSM_RS01615 WP_012341176.1 338739..339806(-) (recA) [Histophilus somni 2336]
ATGGCAACCCCAGAAGAAAAAGCAAAAGCACTTGAAGCCGCTCTAGGACAAATTGAGAAACAATTTGGTAAGGGTGCAAT
TATGAAATTAGGGGAAACCCAAAAACTGGATATTGAAGCAATTTCAACCGGCTCACTTAGTTTGGATGTTGCTTTAGGTA
TCGGCGGCTTACCAATGGGACGTATTGTTGAAATTTTTGGCCCCGAGTCCTCAGGCAAAACGACATTAACACTATCGGTT
ATCGCACAAGCACAAAAAGCAGGTAAAACCTGTGCATTTATTGATGCAGAACACGCACTTGATCCAATTTATGCGGCTAA
ATTAGGTGTTGACGTTAAAGAGTTATTAATTTCTCAACCGGATAACGGAGAGCAAGCACTGGAAATCTGTGATGCTCTCG
TTCGTTCCGGTGCGGTAGACGTTGTGATTGTTGACTCTGTTGCCGCTTTAACACCGAAAGCAGAAATTGAAGGTGAAATG
GGTGATACTCATGTTGGTTTACAAGCAAGACTTATGTCACAAGCATTACGCAAATTAACGGGGCAGATCAAAAACTCAAA
TTGTTTGGTCGTCTTTATCAACCAAATTCGCATGAAAATTGGTGTTGTTTTTGGTAATCCAGAAACTACCACAGGCGGTA
ATGCTTTAAAATTCTACGCTTCTGTTCGTCTTGATATTCGTCGTGTTGGCAGTATCAAAAATGGTGATGAAGTCATTGGT
AATGAAACTCGTGTAAAAGTGGTTAAAAATAAAGTCGCACCTCCGTTCCGCCAAGTTGATTTCCAAATTTTATACGGTGA
GGGTATTTCAAGAAATGGTGAACTTATTGAACTTGGCGTAAAACATAAGTTAGTAAATAAATCCGGTGCTTGGTTCTCCT
ATGAGGGCGAAAAAATTGGTCAAGGGAAAACAAATGCGATGAAATGGTTAGCTGAACATCCTGAGCAAGCTGCTATTTTA
GAGCAAAAATTACGTTCAGAATTATTAGCAAATCCGGAAAAAGCACTATTAGCGGATCTTGAAGCTGAATCAGAATCAAA
CATATCTGAAGTTGAAAGTGATTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	76.437	98.028	0.749
recA	Vibrio cholerae strain A1552	73.851	98.028	0.724
recA	Vibrio cholerae O1 biovar El Tor strain E7946	73.851	98.028	0.724
recA	Pseudomonas stutzeri DSM 10701	76.308	91.549	0.699
recA	Neisseria gonorrhoeae MS11	73.684	90.986	0.67
recA	Neisseria gonorrhoeae MS11	73.684	90.986	0.67
recA	Neisseria gonorrhoeae strain FA1090	73.684	90.986	0.67
recA	Acinetobacter baylyi ADP1	67.919	97.465	0.662
recA	Ralstonia pseudosolanacearum GMI1000	70.732	92.394	0.654
recA	Acinetobacter baumannii D1279779	69.846	91.549	0.639
recA	Helicobacter pylori 26695	61.176	95.775	0.586
recA	Helicobacter pylori strain NCTC11637	61.176	95.775	0.586
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.385	91.549	0.58
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.048	93.521	0.58
recA	Bacillus subtilis subsp. subtilis str. 168	63.438	90.141	0.572
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	92.113	0.558
recA	Streptococcus pneumoniae D39	60.245	92.113	0.555
recA	Streptococcus pneumoniae Rx1	60.245	92.113	0.555
recA	Streptococcus pneumoniae R6	60.245	92.113	0.555
recA	Streptococcus pneumoniae TIGR4	60.245	92.113	0.555
recA	Streptococcus pyogenes NZ131	60.308	91.549	0.552
recA	Streptococcus mutans UA159	60.308	91.549	0.552
recA	Latilactobacillus sakei subsp. sakei 23K	60.559	90.704	0.549
recA	Streptococcus mitis SK321	59.633	92.113	0.549
recA	Streptococcus mitis NCTC 12261	59.327	92.113	0.546
recA	Lactococcus lactis subsp. cremoris KW2	57.231	91.549	0.524