Detailed information NTG0303463

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DU509_RS07325
• Genome accession: NZ_CP031115
• Coordinates: 1433589..1434650 (+)
• Length: 353 a.a.
• NCBI ID: WP_119068016.1
• Uniprot ID: -
• Organism: Rubrobacter indicoceani strain SCSIO 08198
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1428589..1439650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DU509_RS07310	-	1428636..1430279 (+)	1644	WP_119068010.1	ribonuclease J	-
DU509_RS07315	-	1430434..1432803 (+)	2370	WP_162924527.1	FtsK/SpoIIIE family DNA translocase	-
DU509_RS07320	-	1432839..1433414 (+)	576	WP_119068014.1	helix-turn-helix domain-containing protein	-
DU509_RS07325	recA	1433589..1434650 (+)	1062	WP_119068016.1	recombinase RecA	Machinery gene
DU509_RS07330	-	1434687..1435310 (+)	624	WP_119068018.1	regulatory protein RecX	-
DU509_RS07335	rny	1435449..1436993 (+)	1545	WP_119068020.1	ribonuclease Y	-
DU509_RS07340	-	1437065..1437997 (+)	933	WP_162924528.1	ATP-binding protein	-
DU509_RS07345	-	1438039..1439460 (+)	1422	WP_162924529.1	MiaB/RimO family radical SAM methylthiotransferase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37721.76 Da
• Isoelectric Point: 4.9750

>NTDB_id=303463 DU509_RS07325 WP_119068016.1 1433589..1434650(+) (recA) [Rubrobacter indicoceani strain SCSIO 08198]
MDNKNKAIDAAFSQIEKKFGKGAIMRMGDRQAMKIPSISTGSIALDLALGIGGVPRGRIVEIYGPESSGKTTLALHVIAE
AQRAGGVAAFIDAEHALDPSYAQAIGVDLDELYFSQPDNGEQALEIADTLIRSGALDVVVIDSVAALVPRAEIEGEIGDS
HVGLQARLMSQALRKLSGSLSRSDTTAVFINQLREKIGVMFGSPETTPGGRALKFYASVRLDVRRIGALKSGSDTVGNQT
KVTVRKNKVAPPFKVVEFDIMYGEGISKEGSLLDVGIENDVIQKSGAWFAYGDERIGQGRENARKFLKENDEIRERVIAD
IHEKLGFAEGGGVVESGVEEDGVVGNPAERQPV

Nucleotide

• Length: 1062 bp

>NTDB_id=303463 DU509_RS07325 WP_119068016.1 1433589..1434650(+) (recA) [Rubrobacter indicoceani strain SCSIO 08198]
ATGGACAACAAGAACAAGGCCATAGACGCCGCCTTCTCTCAGATCGAGAAGAAGTTCGGCAAGGGCGCCATCATGCGAAT
GGGCGACCGGCAGGCGATGAAGATCCCCTCCATCTCGACCGGCTCCATAGCCCTCGACCTCGCGCTCGGCATCGGCGGTG
TCCCGCGAGGCCGGATAGTCGAGATCTACGGCCCCGAGTCGAGCGGTAAGACGACCCTTGCCCTGCACGTTATCGCCGAA
GCTCAGCGCGCCGGGGGGGTGGCCGCTTTTATAGACGCCGAACACGCCCTTGACCCGTCGTATGCTCAGGCCATCGGCGT
AGACCTCGACGAACTCTATTTCTCGCAGCCGGACAACGGCGAGCAGGCACTCGAGATCGCCGACACCCTTATCCGCTCCG
GCGCCCTTGACGTGGTCGTTATAGACTCTGTTGCGGCCCTGGTGCCTAGAGCTGAGATAGAGGGTGAGATAGGAGACTCT
CACGTCGGGCTTCAGGCTCGTCTGATGAGCCAGGCGCTCAGGAAGCTTTCGGGGTCGTTGAGTCGTTCGGATACAACGGC
GGTTTTCATCAACCAGCTCCGGGAGAAGATCGGGGTGATGTTCGGTTCGCCGGAGACCACGCCGGGCGGGCGGGCGCTGA
AGTTCTATGCGAGCGTGCGGCTCGACGTGCGGCGCATCGGTGCGTTGAAGTCCGGGAGCGATACGGTCGGCAACCAGACA
AAGGTCACGGTGAGAAAAAACAAGGTCGCTCCGCCGTTCAAGGTAGTGGAGTTCGACATCATGTACGGGGAGGGGATCTC
CAAAGAGGGCAGCCTCCTCGACGTTGGCATAGAGAACGATGTCATACAGAAGAGCGGGGCCTGGTTTGCCTACGGGGATG
AGAGGATCGGCCAGGGCCGGGAGAACGCCCGGAAGTTCCTCAAGGAGAACGACGAGATCCGGGAGAGGGTTATAGCCGAC
ATCCACGAGAAGCTTGGTTTCGCCGAGGGCGGCGGCGTAGTGGAGAGCGGTGTCGAGGAAGACGGGGTCGTCGGAAACCC
GGCGGAACGTCAGCCGGTGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (6-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	66.066	94.334	0.623
recA	Streptococcus pneumoniae D39	62.647	96.317	0.603
recA	Streptococcus pneumoniae Rx1	62.647	96.317	0.603
recA	Streptococcus pneumoniae R6	62.647	96.317	0.603
recA	Streptococcus pneumoniae TIGR4	62.647	96.317	0.603
recA	Neisseria gonorrhoeae MS11	66.149	91.218	0.603
recA	Neisseria gonorrhoeae strain FA1090	66.149	91.218	0.603
recA	Neisseria gonorrhoeae MS11	66.149	91.218	0.603
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.463	96.601	0.603
recA	Streptococcus mitis NCTC 12261	62.17	96.601	0.601
recA	Streptococcus mitis SK321	61.877	96.601	0.598
recA	Lactococcus lactis subsp. cremoris KW2	64.506	91.785	0.592
recA	Pseudomonas stutzeri DSM 10701	64.198	91.785	0.589
recA	Ralstonia pseudosolanacearum GMI1000	63.415	92.918	0.589
recA	Helicobacter pylori 26695	62.918	93.201	0.586
recA	Helicobacter pylori strain NCTC11637	62.918	93.201	0.586
recA	Streptococcus pyogenes NZ131	62.918	93.201	0.586
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.727	93.484	0.586
recA	Streptococcus mutans UA159	62.048	94.051	0.584
recA	Glaesserella parasuis strain SC1401	63.58	91.785	0.584
recA	Latilactobacillus sakei subsp. sakei 23K	62.5	92.918	0.581
recA	Acinetobacter baumannii D1279779	60.294	96.317	0.581
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.963	91.785	0.578
recA	Vibrio cholerae strain A1552	62.963	91.785	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.654	91.785	0.575
recA	Acinetobacter baylyi ADP1	62.037	91.785	0.569