Detailed information NTG0302796

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DS731_RS05850
• Genome accession: NZ_CP031010
• Coordinates: 1357706..1358743 (+)
• Length: 345 a.a.
• NCBI ID: WP_119500446.1
• Uniprot ID: -
• Organism: Alteromonas sp. RKMC-009
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1352706..1363743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DS731_RS05840 (DS731_05870)	mutS	1354119..1356692 (-)	2574	WP_119500445.1	DNA mismatch repair protein MutS	-
DS731_RS05845 (DS731_05875)	-	1356982..1357497 (+)	516	WP_119503319.1	CinA family protein	-
DS731_RS05850 (DS731_05880)	recA	1357706..1358743 (+)	1038	WP_119500446.1	recombinase RecA	Machinery gene
DS731_RS05855 (DS731_05885)	-	1359123..1361111 (+)	1989	WP_119500447.1	methyl-accepting chemotaxis protein	-
DS731_RS05860 (DS731_05890)	-	1361165..1361473 (-)	309	WP_119500448.1	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	-
DS731_RS05865 (DS731_05895)	-	1361470..1363533 (-)	2064	WP_119500449.1	flagellar hook-length control protein FliK	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37199.71 Da
• Isoelectric Point: 5.3500

>NTDB_id=302796 DS731_RS05850 WP_119500446.1 1357706..1358743(+) (recA) [Alteromonas sp. RKMC-009]
MDDNKNKALSAALGQIEKQFGKGAIMRLGDNQAHDIEAISTGSLSIDIALGIGGLPCGRVVEIYGPESSGKTTLTLQVIA
EAQKKGKTCAFVDAEHALDPVYARKLGVNIDDLLVSQPDTGEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKKSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDEVVGNE
TRVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYNGDRIGQGKANVMAFLKDNPDIANDIET
KLRAELLAQKTVKPEEAEGETEEKL

Nucleotide

• Length: 1038 bp

>NTDB_id=302796 DS731_RS05850 WP_119500446.1 1357706..1358743(+) (recA) [Alteromonas sp. RKMC-009]
GTGGACGACAACAAAAACAAAGCTCTTTCCGCCGCTCTTGGCCAAATTGAAAAGCAATTTGGTAAAGGTGCCATTATGCG
TCTGGGTGACAATCAGGCACATGATATCGAAGCCATTTCTACCGGTTCACTCAGTATCGATATTGCACTTGGAATAGGCG
GTTTACCTTGCGGGCGTGTTGTTGAAATCTACGGTCCTGAGTCATCAGGTAAAACAACTCTGACACTGCAAGTTATCGCT
GAAGCGCAAAAGAAAGGCAAAACCTGTGCATTCGTTGATGCGGAACACGCACTGGATCCTGTTTACGCAAGAAAGCTGGG
TGTAAACATTGATGACCTGCTGGTCTCTCAGCCTGATACCGGTGAGCAGGCGCTGGAAATTTGTGACATGCTTGTTCGTT
CCGGCGCTGTTGACGTAGTAATTGTTGACTCGGTAGCTGCATTAACACCGAAAGCCGAGATTGAAGGTGAGATGGGTGAT
TCTCACGTGGGTCTTCAGGCACGTCTGATGTCTCAGGCGCTGCGTAAGCTTACCGCTAACATCAAGAAATCGAATACGCT
GTGTATCTTCATCAACCAGATCCGTATGAAGATTGGTGTTATGTTCGGTAACCCTGAAACCACTACCGGTGGTAACGCGC
TGAAATTCTATGCCTCTGTGCGTCTCGATATCCGTCGTATCGGTGCGGTGAAAGAAGGTGATGAGGTTGTTGGTAACGAA
ACCCGTGTGAAAGTGGTGAAGAACAAAGTTGCCCCACCGTTTAAGCAGGCGGAATTCATGATTCGTTACGGCGAGGGTAT
CAGTAAGGAAGCTGAACTTATTGACCTTGGTGTGAAGCAGAAGCTGGTTGATAAAGCCGGTGCCTGGTATAGCTACAACG
GTGACCGTATTGGTCAGGGTAAAGCGAACGTAATGGCGTTCCTGAAAGATAACCCTGATATCGCTAACGACATCGAAACC
AAGCTGCGCGCAGAGTTACTGGCTCAAAAAACAGTGAAGCCTGAAGAAGCCGAAGGCGAAACAGAAGAAAAATTGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	79.205	94.783	0.751
recA	Vibrio cholerae O1 biovar El Tor strain E7946	79.205	94.783	0.751
recA	Pseudomonas stutzeri DSM 10701	78.593	94.783	0.745
recA	Acinetobacter baylyi ADP1	72.965	99.71	0.728
recA	Acinetobacter baumannii D1279779	72.174	100	0.722
recA	Neisseria gonorrhoeae MS11	73.538	94.203	0.693
recA	Neisseria gonorrhoeae MS11	73.538	94.203	0.693
recA	Neisseria gonorrhoeae strain FA1090	73.538	94.203	0.693
recA	Glaesserella parasuis strain SC1401	73.457	93.913	0.69
recA	Ralstonia pseudosolanacearum GMI1000	73.312	90.145	0.661
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.62	99.13	0.641
recA	Helicobacter pylori strain NCTC11637	63.582	97.101	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	66.25	92.754	0.614
recA	Helicobacter pylori 26695	62.985	97.101	0.612
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.575	96.812	0.606
recA	Streptococcus mutans UA159	59.429	100	0.603
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.538	94.203	0.58
recA	Streptococcus mitis NCTC 12261	61.043	94.493	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	61.491	93.333	0.574
recA	Streptococcus pyogenes NZ131	60.366	95.072	0.574
recA	Streptococcus pneumoniae Rx1	60.736	94.493	0.574
recA	Streptococcus pneumoniae D39	60.736	94.493	0.574
recA	Streptococcus pneumoniae TIGR4	60.736	94.493	0.574
recA	Streptococcus pneumoniae R6	60.736	94.493	0.574
recA	Streptococcus mitis SK321	60.736	94.493	0.574
recA	Lactococcus lactis subsp. cremoris KW2	58.025	93.913	0.545