Detailed information NTG0301722

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DRA66_RS05440
• Genome accession: NZ_CP030825
• Coordinates: 1059901..1060947 (-)
• Length: 348 a.a.
• NCBI ID: WP_002216923.1
• Uniprot ID: A1KUQ0
• Organism: Neisseria meningitidis strain 12-208
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1058551..1059516	1059901..1060947	flank	385

Gene organization within MGE regions

Location: 1058551..1060947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DRA66_RS05430 (DRA66_06240)	-	1058551..1059516 (+)	966	WP_002221064.1	IS30-like element IS1655 family transposase	-
DRA66_RS05440 (DRA66_06245)	recA	1059901..1060947 (-)	1047	WP_002216923.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37640.89 Da
• Isoelectric Point: 4.8330

>NTDB_id=301722 DRA66_RS05440 WP_002216923.1 1059901..1060947(-) (recA) [Neisseria meningitidis strain 12-208]
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAV
AQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGN
ETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEID
AKIRALNGIEMHITEGTQDETDGERPEE

Nucleotide

• Length: 1047 bp

>NTDB_id=301722 DRA66_RS05440 WP_002216923.1 1059901..1060947(-) (recA) [Neisseria meningitidis strain 12-208]
ATGTCAGACGACAAAAGCAAAGCACTTGCCGCCGCACTGGCGCAAATCGAAAAAAGTTTCGGCAAAGGCGCCATCATGAA
AATGGACGGCAGCCAGCAGGAAGAAAACCTCGAAGTCATTTCCACCGGATCGCTCGGATTAGACCTCGCCCTCGGAGTCG
GCGGTCTGCCGCGCGGGCGCATCGTCGAAATCTTCGGCCCAGAATCCTCCGGCAAAACCACCCTCTGCCTCGAAGCCGTC
GCCCAATGCCAGAAAAACGGCGGCGTGTGCGCCTTTGTCGATGCCGAACACGCCTTCGATCCCGTTTACGCCCGCAAACT
CGGCGTAAAAGTCGAAGAGCTTTACCTGTCCCAGCCCGATACCGGCGAACAGGCTTTGGAAATCTGCGACACACTCGTCC
GTTCGGGCGGCATAGATATGGTAGTCGTCGATTCCGTAGCCGCACTCGTCCCCAAAGCCGAAATCGAAGGCGATATGGGG
GACAGCCATGTCGGACTGCAGGCGCGCCTGATGAGCCAGGCTTTGCGCAAACTGACCGGACACATCAAAAAAACCAACAC
GCTGGTTGTGTTCATCAACCAAATCCGGATGAAGATCGGCGTAATGTTCGGCAGCCCCGAGACCACGACCGGCGGCAACG
CGCTGAAATTCTATTCTTCCGTCCGCCTCGACATCCGCCGCACCGGATCCATCAAAAAAGGTGAAGAAGTATTGGGCAAC
GAAACCCGCGTCAAAGTCATCAAAAACAAAGTCGCGCCGCCGTTCCGTCAGGCAGAGTTTGACATCCTCTACGGAGAAGG
CATCAGTTGGGAAGGCGAATTGATCGACATCGGCGTGAAAAACGACATCATCAACAAATCCGGCGCGTGGTACAGCTACA
ACGGCGCGAAAATCGGTCAGGGCAAAGACAACGTCCGCGTCTGGCTGAAGGAAAATCCCGAAATTGCCGACGAAATCGAC
GCAAAAATCCGCGCCCTCAACGGCATAGAAATGCACATCACCGAAGGGACGCAGGACGAAACCGACGGCGAACGCCCCGA
AGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A1KUQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	99.425	100	0.994
recA	Neisseria gonorrhoeae MS11	99.425	100	0.994
recA	Neisseria gonorrhoeae strain FA1090	99.425	100	0.994
recA	Ralstonia pseudosolanacearum GMI1000	74.468	94.54	0.704
recA	Vibrio cholerae strain A1552	67.232	100	0.684
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.232	100	0.684
recA	Glaesserella parasuis strain SC1401	67.521	100	0.681
recA	Pseudomonas stutzeri DSM 10701	71.692	93.391	0.67
recA	Acinetobacter baylyi ADP1	66.571	99.713	0.664
recA	Acinetobacter baumannii D1279779	65.805	100	0.658
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.689	97.989	0.644
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.378	94.253	0.635
recA	Helicobacter pylori 26695	67.385	93.391	0.629
recA	Helicobacter pylori strain NCTC11637	67.077	93.391	0.626
recA	Streptococcus mutans UA159	60.969	100	0.615
recA	Bacillus subtilis subsp. subtilis str. 168	65.138	93.966	0.612
recA	Streptococcus pneumoniae TIGR4	59.091	100	0.598
recA	Streptococcus pneumoniae Rx1	59.091	100	0.598
recA	Streptococcus pneumoniae D39	59.091	100	0.598
recA	Streptococcus pneumoniae R6	59.091	100	0.598
recA	Streptococcus mitis NCTC 12261	59.884	98.851	0.592
recA	Latilactobacillus sakei subsp. sakei 23K	62.997	93.966	0.592
recA	Streptococcus pyogenes NZ131	61.963	93.678	0.58
recA	Streptococcus mitis SK321	60.606	94.828	0.575
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.121	95.115	0.572
recA	Lactococcus lactis subsp. cremoris KW2	60.303	94.828	0.572