Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   MAE_RS07075 Genome accession   NC_010296
Coordinates   1445173..1446240 (+) Length   355 a.a.
NCBI ID   WP_012264958.1    Uniprot ID   B0JV95
Organism   Microcystis aeruginosa NIES-843     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1440173..1451240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MAE_RS07050 (MAE_16020) - 1441056..1441472 (+) 417 WP_002751648.1 XisH family protein -
  MAE_RS07055 (MAE_16030) - 1441460..1441795 (+) 336 WP_002748301.1 XisI protein -
  MAE_RS07060 (MAE_16040) - 1441967..1443058 (+) 1092 WP_012264593.1 ISAs1 family transposase -
  MAE_RS07070 (MAE_16060) - 1444092..1445045 (+) 954 WP_012264957.1 aldo/keto reductase -
  MAE_RS07075 (MAE_16070) recA 1445173..1446240 (+) 1068 WP_012264958.1 recombinase RecA Machinery gene
  MAE_RS35625 - 1446459..1446656 (-) 198 Protein_1464 hypothetical protein -
  MAE_RS34480 (MAE_16090) - 1446967..1448817 (+) 1851 WP_012264960.1 CHAP domain-containing protein -
  MAE_RS07090 (MAE_16100) - 1448946..1449611 (+) 666 WP_012264961.1 hypothetical protein -
  MAE_RS07095 (MAE_16110) - 1449662..1450096 (+) 435 WP_012264962.1 hypothetical protein -
  MAE_RS07100 (MAE_16120) - 1450181..1450501 (+) 321 WP_012264963.1 hypothetical protein -
  MAE_RS07105 (MAE_16130) - 1450676..1451236 (-) 561 WP_012264964.1 hypothetical protein -

Sequence

Protein


Download         Length: 355 a.a.        Molecular weight: 38199.54 Da        Isoelectric Point: 4.7005

>NTDB_id=29868 MAE_RS07075 WP_012264958.1 1445173..1446240(+) (recA) [Microcystis aeruginosa NIES-843]
MATMTNNSDRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIYGPESSGKTTLAL
HAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAALEIVDQLVRSSAVDIVVIDSVAALVPRAEIEG
EMGDNQVGLQARLMSKALRKIAGNIGKSGCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLKKGTEG
EYGIRAKVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGRDNAVKYLEERPEVA
AEIEKLLRDKLDMGSVPFPTEPADEDEGDDEEPEI

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=29868 MAE_RS07075 WP_012264958.1 1445173..1446240(+) (recA) [Microcystis aeruginosa NIES-843]
ATGGCGACAATGACAAATAATTCCGATCGAGATAAAGCCTTAGGCCTAGTCTTAAATCAAATCGAGCGCAACTTTGGCAA
AGGTTCGATCATGCGTTTGGGAGACGCCACCCGGATGCGGGTGGAAACCGTGCCTAGTGGTGCTTTAACCCTAGATATGG
CCTTGGGTGGCGGTTTACCGAAAGGCCGTATCGTCGAAATTTACGGGCCAGAAAGTTCTGGAAAAACCACCTTAGCCCTC
CATGCGATCGCAGAAGTGCAGAAAGCTGGGGGAGTGGCGGCCTTTGTCGATGCGGAACACGCTTTAGATCCCACCTATTC
GGAAGATTTAGGGGTAGATATCAATAATTTACTGGTGGCACAACCGGATACGGGGGAGGCTGCCTTAGAAATAGTTGACC
AGTTAGTGCGTTCTTCGGCCGTGGATATCGTTGTCATCGACTCGGTGGCCGCTTTAGTGCCGCGGGCGGAAATTGAAGGG
GAAATGGGGGATAATCAGGTGGGTTTGCAGGCCCGTTTGATGAGTAAAGCCCTGCGAAAAATTGCTGGTAATATTGGTAA
ATCCGGTTGTGTGGTGATTTTCCTCAACCAACTGCGGCAAAAAATCGGTGTCACCTACGGCAATCCTGAAGTGACCACCG
GAGGAACGGCCTTAAAATTTTATGCCTCGGTGCGTTTAGATATCCGTCGCATTCAAACTTTGAAAAAAGGCACGGAAGGG
GAATACGGAATTCGGGCTAAAGTTAAGGTGGCTAAAAATAAAGTTGCGCCTCCTTTCCGGATTGCTGAATTTGATATTAT
CTTCGGTAAAGGCATTTCCCAAGTGGGTTGTATGCTCGATATCGCCGAACAAACTAACGTGGTTACTCGTAAAGGGGCAT
GGTATAGCTATAATGGCGAAAATATTGCCCAGGGTCGCGATAATGCCGTTAAATATCTCGAAGAAAGGCCAGAAGTAGCG
GCAGAAATTGAGAAGTTATTGCGGGATAAATTAGACATGGGTTCGGTTCCTTTCCCCACGGAACCTGCCGATGAGGACGA
GGGGGACGATGAGGAACCAGAAATCTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(12-273)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B0JV95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

61.714

98.592

0.608
  recA Pseudomonas stutzeri DSM 10701

60.465

96.901

0.586
  recA Acinetobacter baumannii D1279779

60.465

96.901

0.586
  recA Ralstonia pseudosolanacearum GMI1000

62.424

92.958

0.58
  recA Helicobacter pylori strain NCTC11637

57.429

98.592

0.566
  recA Neisseria gonorrhoeae MS11

57.429

98.592

0.566
  recA Neisseria gonorrhoeae MS11

57.429

98.592

0.566
  recA Neisseria gonorrhoeae strain FA1090

57.429

98.592

0.566
  recA Helicobacter pylori 26695

57.429

98.592

0.566
  recA Latilactobacillus sakei subsp. sakei 23K

58.824

95.775

0.563
  recA Glaesserella parasuis strain SC1401

57.803

97.465

0.563
  recA Bacillus subtilis subsp. subtilis str. 168

61.3

90.986

0.558
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

58.209

94.366

0.549
  recA Streptococcus pneumoniae R6

58.308

93.239

0.544
  recA Streptococcus pneumoniae Rx1

58.308

93.239

0.544
  recA Streptococcus pneumoniae D39

58.308

93.239

0.544
  recA Streptococcus pneumoniae TIGR4

58.308

93.239

0.544
  recA Vibrio cholerae O1 biovar El Tor strain E7946

59.202

91.831

0.544
  recA Vibrio cholerae strain A1552

59.202

91.831

0.544
  recA Streptococcus mitis SK321

58.589

91.831

0.538
  recA Lactococcus lactis subsp. cremoris KW2

57.576

92.958

0.535
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

54.913

97.465

0.535
  recA Streptococcus mitis NCTC 12261

57.975

91.831

0.532
  recA Streptococcus pyogenes NZ131

57.012

92.394

0.527
  recA Streptococcus mutans UA159

56.481

91.268

0.515
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

55.312

90.141

0.499

Multiple sequence alignment