Detailed information NTG0293274

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DKM44_RS04115
• Genome accession: NZ_CP029494
• Coordinates: 814133..815221 (-)
• Length: 362 a.a.
• NCBI ID: WP_109825665.1
• Uniprot ID: A0A2Z3JGB4
• Organism: Deinococcus irradiatisoli strain 17bor-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 809133..820221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKM44_RS04095 (DKM44_04095)	-	810268..810948 (+)	681	WP_109825659.1	response regulator transcription factor	-
DKM44_RS04100 (DKM44_04100)	-	810945..812033 (+)	1089	WP_109825661.1	cellulase family glycosylhydrolase	-
DKM44_RS04105 (DKM44_04105)	-	812137..813192 (+)	1056	WP_109825663.1	ester cyclase	-
DKM44_RS04110 (DKM44_04110)	-	813291..813979 (-)	689	Protein_820	transposase	-
DKM44_RS04115 (DKM44_04115)	recA	814133..815221 (-)	1089	WP_109825665.1	recombinase RecA	Machinery gene
DKM44_RS04120 (DKM44_04120)	thpR	815218..815913 (-)	696	WP_109825667.1	RNA 2',3'-cyclic phosphodiesterase	-
DKM44_RS04125 (DKM44_04125)	-	815910..817142 (-)	1233	WP_109825669.1	molybdopterin-binding protein	-
DKM44_RS04130 (DKM44_04130)	ddrC	817256..818014 (-)	759	WP_245896027.1	DNA damage response protein DdrC	-
DKM44_RS04140 (DKM44_04140)	-	818413..818661 (+)	249	WP_109825673.1	hypothetical protein	-
DKM44_RS04145 (DKM44_04145)	-	818854..819852 (+)	999	WP_109825675.1	HAMP domain-containing protein	-

Sequence

Protein

• Length: 362 a.a.
• Molecular weight: 38465.12 Da
• Isoelectric Point: 6.1546

>NTDB_id=293274 DKM44_RS04115 WP_109825665.1 814133..815221(-) (recA) [Deinococcus irradiatisoli strain 17bor-2]
MIKEPTKETTAAPNNDKERSKAIETAMSQIEKQFGKGSIVKLGANTKLDVQVISTGSLSLDLALGVGGIPRGRVTEIYGP
ESGGKTTLALAIIAQAQKVGGTAAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAVDVVVVDSVA
ALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVREKIGVMYGNPETTTGGRALKFYASVRLDVRK
IGQPTKVGNDAVANTVKIKTVKNKVAAPFKEVELALVYGKGFDQLTDLITLAADMDIVKKAGSFYSYNEERIGQGKDKAI
AYIAERPELEREIRERVTAAIKAGNVKEAVKTAPESEAVAAE

Nucleotide

• Length: 1089 bp

>NTDB_id=293274 DKM44_RS04115 WP_109825665.1 814133..815221(-) (recA) [Deinococcus irradiatisoli strain 17bor-2]
ATGATCAAAGAACCCACCAAAGAAACCACTGCCGCGCCCAACAACGACAAGGAGCGCAGCAAGGCCATCGAAACGGCCAT
GAGCCAGATCGAGAAGCAGTTCGGCAAGGGCAGCATCGTCAAGCTGGGGGCCAACACCAAGCTCGACGTGCAGGTGATCA
GCACCGGCAGCCTCAGCCTCGATCTGGCGCTGGGCGTCGGCGGCATTCCGCGCGGGCGCGTCACCGAGATCTACGGCCCC
GAGTCCGGCGGTAAAACCACCCTGGCGCTGGCGATCATTGCCCAGGCCCAGAAGGTCGGCGGCACGGCGGCCTTTATCGA
CGCCGAGCACGCGCTCGACCCGGTGTACGCCCGCGCCCTGGGCGTCAACACCGACGAACTGCTGGTGTCGCAGCCCGACA
ACGGCGAGCAGGCGCTGGAAATCATGGAACTGCTGGTCCGCAGCGGCGCCGTCGACGTGGTCGTCGTGGACTCGGTGGCG
GCCCTGACCCCGCGAGCCGAGATCGAGGGCGACATGGGCGACTCGCTGCCGGGCCTGCAAGCCCGCCTGATGTCGCAGGC
GCTGCGCAAACTGACCGCCATTCTCTCCAAGACTGGCACCGCCGCCATCTTCATCAACCAGGTGCGCGAGAAGATCGGCG
TGATGTACGGCAATCCCGAAACCACCACCGGCGGCCGGGCGCTGAAATTCTACGCCTCGGTACGCCTGGACGTGCGCAAG
ATCGGCCAGCCCACCAAGGTCGGCAACGACGCGGTGGCCAACACCGTCAAGATCAAGACGGTGAAGAACAAGGTCGCCGC
GCCGTTCAAGGAAGTCGAGCTGGCGCTGGTGTACGGCAAGGGCTTCGATCAGCTCACCGACCTGATCACGCTGGCCGCCG
ACATGGACATCGTGAAGAAGGCCGGCAGCTTCTACAGCTACAACGAGGAACGCATCGGCCAGGGCAAGGACAAGGCGATC
GCCTACATCGCCGAGCGCCCCGAACTGGAGCGCGAGATCCGCGAGCGCGTGACCGCCGCCATCAAGGCCGGTAACGTCAA
GGAAGCCGTGAAAACCGCGCCCGAGAGCGAAGCGGTCGCCGCCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-282)

3D structure

• AlphaFold DB: A0A2Z3JGB4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	90.725	95.304	0.865
recA	Glaesserella parasuis strain SC1401	62.908	93.094	0.586
recA	Streptococcus pneumoniae Rx1	61.404	94.475	0.58
recA	Streptococcus pneumoniae TIGR4	61.404	94.475	0.58
recA	Streptococcus pneumoniae R6	61.404	94.475	0.58
recA	Streptococcus pneumoniae D39	61.404	94.475	0.58
recA	Streptococcus mitis SK321	61.471	93.923	0.577
recA	Streptococcus mitis NCTC 12261	61.471	93.923	0.577
recA	Acinetobacter baumannii D1279779	63.497	90.055	0.572
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.272	89.503	0.566
recA	Vibrio cholerae strain A1552	63.272	89.503	0.566
recA	Bacillus subtilis subsp. subtilis str. 168	62.813	88.398	0.555
recA	Streptococcus pyogenes NZ131	61.92	89.227	0.552
recA	Acinetobacter baylyi ADP1	62.893	87.845	0.552
recA	Latilactobacillus sakei subsp. sakei 23K	57.895	94.475	0.547
recA	Streptococcus mutans UA159	61.3	89.227	0.547
recA	Ralstonia pseudosolanacearum GMI1000	63.312	85.083	0.539
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.725	94.475	0.536
recA	Neisseria gonorrhoeae MS11	59.752	89.227	0.533
recA	Neisseria gonorrhoeae MS11	59.752	89.227	0.533
recA	Neisseria gonorrhoeae strain FA1090	59.752	89.227	0.533
recA	Lactococcus lactis subsp. cremoris KW2	57.975	90.055	0.522
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.492	90.331	0.519
recA	Helicobacter pylori 26695	57.187	90.331	0.517
recA	Helicobacter pylori strain NCTC11637	57.187	90.331	0.517
recA	Pseudomonas stutzeri DSM 10701	57.055	90.055	0.514