Detailed information NTG0291567

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DGM93_RS08645
• Genome accession: NZ_CP029277
• Coordinates: 1979831..1980865 (+)
• Length: 344 a.a.
• NCBI ID: WP_008574635.1
• Uniprot ID: A0A3Q9Q2C2
• Organism: Xanthomonas phaseoli pv. phaseoli strain PR1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1974831..1985865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DGM93_RS08630 (DGM93_09050)	-	1976294..1976788 (+)	495	WP_003481865.1	CinA family protein	-
DGM93_RS08635 (DGM93_09055)	ubiB	1977253..1978929 (+)	1677	WP_017155111.1	2-polyprenylphenol 6-hydroxylase	-
DGM93_RS08640 (DGM93_09060)	lexA	1979017..1979658 (+)	642	WP_039570103.1	transcriptional repressor LexA	-
DGM93_RS08645 (DGM93_09065)	recA	1979831..1980865 (+)	1035	WP_008574635.1	recombinase RecA	Machinery gene
DGM93_RS08650 (DGM93_09075)	recX	1981159..1981647 (+)	489	WP_017155113.1	recombination regulator RecX	-
DGM93_RS08655 (DGM93_09080)	alaS	1981749..1984397 (+)	2649	WP_039570105.1	alanine--tRNA ligase	-
DGM93_RS08660 (DGM93_09085)	csrA	1984537..1984749 (+)	213	WP_019300306.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37175.68 Da
• Isoelectric Point: 5.0698

>NTDB_id=291567 DGM93_RS08645 WP_008574635.1 1979831..1980865(+) (recA) [Xanthomonas phaseoli pv. phaseoli strain PR1]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNPQVATRL
EAELREKFQPAEAPREAGDDEDKE

Nucleotide

• Length: 1035 bp

>NTDB_id=291567 DGM93_RS08645 WP_008574635.1 1979831..1980865(+) (recA) [Xanthomonas phaseoli pv. phaseoli strain PR1]
ATGGACGAGAACAAGAAGCGTGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGCTCGGTCATGCG
CATGGGCGACCGCGTCATTGAGGCGGTCGAAGTCATCCCGACCGGCTCGCTGATGCTGGATATCGCCCTGGGGATCGGCG
GCCTGCCGAAGGGCCGCGTGGTCGAAATCTACGGCCCGGAATCCTCCGGCAAGACCACCTTGACCCTGCAAGCCATCGCC
CAGTGCCAGAAGAACGGCGGCACCGCTGCCTTCATCGATGCCGAGCACGCGCTGGATCCGATTTATGCAGCCAAGCTGGG
CGTCAACGTCGACGACCTGCTGCTGTCGCAGCCCGATACCGGTGAGCAGGCATTGGAAATTGCCGACATGCTGGTGCGCT
CGGGTTCGGTCGATATCGTCGTGGTCGACTCGGTTGCCGCACTGACGCCGAAGGCGGAAATCGAAGGCGAGATGGGCGAC
CAGCTGCCTGGTTTGCAGGCTCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAATATCAAGCGCTCCAACACGCT
GGTGGTCTTCATCAATCAGCTGCGCATGAAGATCGGCGTCATGATGCCCGGCCAGAGCCCGGAAGTGACCACCGGCGGTA
ACGCGCTGAAGTTCTACGCCTCGGTGCGTCTGGATATCCGCCGTATCGGTGCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAACAGGTCGTGACCGAAATCCTGTATGGCGA
AGGTATCAGCCGCGAGGGCGAATTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGACAAGGCTGGCGCCTGGTACAGCT
ACGGCGATGAGCGCATCGGTCAGGGCAAGGACAATGCGCGGACCTACCTGCGCGACAACCCGCAGGTTGCGACCCGGCTG
GAAGCCGAGCTGCGTGAGAAGTTCCAGCCGGCCGAAGCACCGCGCGAAGCCGGCGACGACGAAGACAAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: A0A3Q9Q2C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	70.93	100	0.709
recA	Pseudomonas stutzeri DSM 10701	70.623	97.965	0.692
recA	Acinetobacter baumannii D1279779	72.256	95.349	0.689
recA	Ralstonia pseudosolanacearum GMI1000	75.08	90.988	0.683
recA	Vibrio cholerae strain A1552	70.859	94.767	0.672
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.859	94.767	0.672
recA	Neisseria gonorrhoeae MS11	69.325	94.767	0.657
recA	Neisseria gonorrhoeae MS11	69.325	94.767	0.657
recA	Neisseria gonorrhoeae strain FA1090	69.325	94.767	0.657
recA	Glaesserella parasuis strain SC1401	65.407	100	0.654
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.174	97.093	0.613
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.047	100	0.61
recA	Latilactobacillus sakei subsp. sakei 23K	61.976	97.093	0.602
recA	Helicobacter pylori strain NCTC11637	61.747	96.512	0.596
recA	Helicobacter pylori 26695	61.446	96.512	0.593
recA	Bacillus subtilis subsp. subtilis str. 168	62.462	94.477	0.59
recA	Streptococcus pneumoniae D39	61.585	95.349	0.587
recA	Streptococcus mitis SK321	61.585	95.349	0.587
recA	Streptococcus pneumoniae Rx1	61.585	95.349	0.587
recA	Streptococcus pneumoniae R6	61.585	95.349	0.587
recA	Streptococcus pneumoniae TIGR4	61.585	95.349	0.587
recA	Streptococcus pyogenes NZ131	60.909	95.93	0.584
recA	Streptococcus mitis NCTC 12261	61.28	95.349	0.584
recA	Streptococcus mutans UA159	60.606	95.93	0.581
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.788	95.93	0.564
recA	Lactococcus lactis subsp. cremoris KW2	59.385	94.477	0.561