Detailed information NTG0284252

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: C7Y67_RS02485
• Genome accession: NZ_CP028342
• Coordinates: 482170..483216 (+)
• Length: 348 a.a.
• NCBI ID: WP_108744746.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus isolate R13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 477170..488216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7Y67_RS02470 (C7Y67_02470)	mutS	478040..480601 (-)	2562	WP_025546664.1	DNA mismatch repair protein MutS	-
C7Y67_RS02475 (C7Y67_02475)	pncC	480686..481168 (+)	483	WP_021450025.1	nicotinamide-nucleotide amidase	-
C7Y67_RS02480 (C7Y67_02480)	recA	481369..481986 (+)	618	Protein_392	recombinase RecA	-
C7Y67_RS02485 (C7Y67_02485)	recA	482170..483216 (+)	1047	WP_108744746.1	recombinase RecA	Machinery gene
C7Y67_RS02490 (C7Y67_02490)	-	483234..485258 (+)	2025	WP_159087258.1	hypothetical protein	-
C7Y67_RS02495 (C7Y67_02495)	-	485258..487561 (+)	2304	WP_108744748.1	site-specific integrase	-
C7Y67_RS02500 (C7Y67_02500)	-	487563..488096 (+)	534	WP_108744749.1	hypothetical protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37268.67 Da
• Isoelectric Point: 4.9565

>NTDB_id=284252 C7Y67_RS02485 WP_108744746.1 482170..483216(+) (recA) [Vibrio parahaemolyticus isolate R13]
MDDNKQKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLALDIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIA
AAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLVSQPDTGEQALEIADALARSGAVDILVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKITGNLKASNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNRYGELIDLGVKNKLVEKAGAWYSYQGDKIGQGKANACKHIEENSHIAEELDA
KLRELLLAPAVEQPEEAVSKDVAEDDAF

Nucleotide

• Length: 1047 bp

>NTDB_id=284252 C7Y67_RS02485 WP_108744746.1 482170..483216(+) (recA) [Vibrio parahaemolyticus isolate R13]
ATGGATGATAATAAGCAAAAAGCACTGGCCGCAGCACTAGGTCAAATTGAGAAGCAGTTTGGTAAAGGCAGCATCATGAA
GTTGGGTGACAACCGCACCATGGATGTTGAAACTGTTTCAACAGGTTCTCTTGCGCTAGACATCGCTCTAGGTGCGGGTG
GTCTTCCAATGGGTCGTATCGTTGAAATCTACGGCCCAGAGTCATCAGGTAAAACGACTCTTACTCTAGAAGTAATCGCA
GCAGCACAAAAAGCTGGAAAAACTTGTGCATTTATCGATGCTGAGCACGCTCTAGACCCAATCTACGCACAGAAGCTAGG
TGTAGATATCGACCAGCTATTGGTATCCCAGCCGGATACTGGTGAGCAGGCGCTAGAGATCGCTGACGCCCTAGCTCGCT
CAGGTGCAGTTGACATCTTGGTTGTTGACTCAGTTGCCGCTCTGACGCCTAAGGCAGAGATCGAAGGTGAGATGGGTGAT
AGCCATATGGGTCTTCAGGCTCGAATGCTTTCGCAAGCTATGCGTAAGATTACAGGTAACCTGAAAGCCTCGAATTGCAT
GTGCATATTTATCAACCAAATCCGCATGAAAATTGGAGTTATGTTTGGGAATCCCGAGACTACAACAGGCGGAAATGCCC
TAAAATTCTACGCTTCAGTACGCCTAGATATCCGTCGTACAGGGGCTATCAAGGAAGGTGATGAGGTTGTTGGTAACGAA
ACTCGGATCAAAGTCGTTAAGAATAAAATTGCAGCTCCATTCAAGCAGGCTGAAACTCAAATCCTTTATGGAAAAGGCTT
CAACCGTTACGGTGAACTGATTGACTTAGGCGTGAAGAACAAGCTGGTTGAGAAAGCTGGCGCTTGGTACAGCTATCAAG
GTGACAAGATCGGCCAAGGTAAAGCCAATGCTTGTAAGCACATCGAAGAAAACAGTCATATCGCTGAAGAACTTGATGCC
AAGTTGCGTGAATTGCTTCTTGCTCCTGCTGTGGAACAGCCAGAAGAAGCTGTAAGTAAAGATGTTGCTGAGGATGATGC
ATTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	88.45	94.54	0.836
recA	Vibrio cholerae O1 biovar El Tor strain E7946	88.45	94.54	0.836
recA	Acinetobacter baylyi ADP1	75.676	95.69	0.724
recA	Pseudomonas stutzeri DSM 10701	72.543	99.425	0.721
recA	Acinetobacter baumannii D1279779	76.453	93.966	0.718
recA	Glaesserella parasuis strain SC1401	70.062	93.103	0.652
recA	Neisseria gonorrhoeae MS11	68.712	93.678	0.644
recA	Neisseria gonorrhoeae MS11	68.712	93.678	0.644
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.678	0.644
recA	Ralstonia pseudosolanacearum GMI1000	71.704	89.368	0.641
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.862	95.69	0.592
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	92.241	0.586
recA	Helicobacter pylori strain NCTC11637	58.772	98.276	0.578
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.009	91.667	0.578
recA	Helicobacter pylori 26695	58.48	98.276	0.575
recA	Streptococcus pneumoniae D39	61.3	92.816	0.569
recA	Streptococcus pneumoniae TIGR4	61.3	92.816	0.569
recA	Streptococcus pneumoniae R6	61.3	92.816	0.569
recA	Streptococcus pneumoniae Rx1	61.3	92.816	0.569
recA	Streptococcus mitis NCTC 12261	60.991	92.816	0.566
recA	Latilactobacillus sakei subsp. sakei 23K	61.371	92.241	0.566
recA	Streptococcus mutans UA159	60.615	93.391	0.566
recA	Streptococcus pyogenes NZ131	60.308	93.391	0.563
recA	Streptococcus mitis SK321	60.681	92.816	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.905	90.517	0.56
recA	Lactococcus lactis subsp. cremoris KW2	59.133	92.816	0.549