Detailed information NTG0278605

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DSM101856_RS08655
• Genome accession: NZ_CP027639
• Coordinates: 1678120..1679151 (-)
• Length: 343 a.a.
• NCBI ID: WP_002779414.1
• Uniprot ID: A0A0Q2IZL1
• Organism: Campylobacter coli strain meC0280
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1673120..1684151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DSM101856_RS09165 (DSM101856_01744)	-	1673459..1673593 (-)	135	WP_002842708.1	hypothetical protein	-
DSM101856_RS08605 (DSM101856_01745)	proB	1673672..1674427 (-)	756	WP_002779409.1	glutamate 5-kinase	-
DSM101856_RS08635 (DSM101856_01751)	-	1675116..1675955 (-)	840	WP_002829325.1	DNA ligase	-
DSM101856_RS08640 (DSM101856_01752)	-	1675955..1676617 (-)	663	WP_002780014.1	AMIN domain-containing protein	-
DSM101856_RS08645 (DSM101856_01753)	-	1676607..1676810 (-)	204	WP_002779412.1	hypothetical protein	-
DSM101856_RS08650 (DSM101856_01754)	eno	1676876..1678120 (-)	1245	WP_002779413.1	phosphopyruvate hydratase	-
DSM101856_RS08655 (DSM101856_01755)	recA	1678120..1679151 (-)	1032	WP_002779414.1	recombinase RecA	Machinery gene
DSM101856_RS08660 (DSM101856_01756)	-	1679261..1680124 (+)	864	WP_002783558.1	menaquinone biosynthesis family protein	-
DSM101856_RS08665 (DSM101856_01757)	fliQ	1680136..1680405 (+)	270	WP_002779416.1	flagellar biosynthesis protein FliQ	-
DSM101856_RS08670 (DSM101856_01758)	-	1680402..1681178 (+)	777	WP_002779417.1	UDP-N-acetylmuramate dehydrogenase	-
DSM101856_RS08675 (DSM101856_01759)	-	1681287..1681460 (+)	174	WP_002779418.1	hypothetical protein	-
DSM101856_RS08680 (DSM101856_01760)	-	1681465..1682226 (-)	762	WP_002779419.1	hypothetical protein	-
DSM101856_RS08685 (DSM101856_01761)	-	1682263..1683027 (-)	765	WP_002780009.1	inositol monophosphatase family protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37135.40 Da
• Isoelectric Point: 4.9075

>NTDB_id=278605 DSM101856_RS08655 WP_002779414.1 1678120..1679151(-) (recA) [Campylobacter coli strain meC0280]
MDDNKKKSLDAALKSLDKAFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGIPKGRIIEIYGPESSGKTTLTLHIIA
ECQKAGGVCAFIDAEHALDVKYAKNLGVDTDNLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFYASVRLDVRKVATLKQNEEPIGN
RVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELIDYGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEIT
KEIQNSMGIEGMISSSEDEEGEE

Nucleotide

• Length: 1032 bp

>NTDB_id=278605 DSM101856_RS08655 WP_002779414.1 1678120..1679151(-) (recA) [Campylobacter coli strain meC0280]
ATGGACGATAATAAGAAAAAATCGCTTGATGCCGCCTTAAAATCGCTCGATAAAGCTTTTGGCAAGGGCACTATTTTAAG
GCTTGGAGATAAGGAAGTAGAGCAGATTGATAGCATAGGAACAGGTTCTGTAGGACTTGATCTTGCACTTGGTATAGGCG
GAATTCCAAAAGGAAGAATTATTGAAATTTATGGGCCTGAAAGTTCAGGTAAAACAACTTTAACTTTGCATATTATAGCA
GAGTGTCAAAAAGCGGGTGGGGTTTGTGCCTTTATCGATGCTGAGCATGCTTTGGATGTAAAATATGCTAAAAATTTGGG
CGTAGATACAGATAATCTTTATATTTCTCAACCCGATTTTGGTGAGCAGGCTTTAGAGATCGTTGAAACCATAGCACGAA
GTGGGGCTATAGATTTGATAGTTGTAGATAGCGTTGCAGCACTTACTCCAAAAGCTGAAATCGAAGGCGATATGGGAGAT
CAGCATGTAGGGCTTCAAGCAAGACTTATGTCTCAAGCATTAAGAAAGCTTACAGGAATTGTCCATAAAATGAATACAAC
CGTGATTTTTATCAACCAAATTCGTATGAAAATTGGCGCTATGGGTTATGGAACTCCTGAAACAACAACAGGAGGAAATG
CACTCAAATTTTATGCTTCAGTGCGTTTAGATGTTAGAAAAGTAGCGACTTTAAAACAAAATGAAGAGCCTATTGGTAAC
CGTGTTAAAGTTAAAGTAGTAAAAAATAAAGTAGCACCTCCATTTAGACAAGCTGAATTTGATGTAATGTTTGGAGAGGG
TTTAAGCCGTGAGGGTGAATTGATCGATTATGGTGTAAAACTTGATATAGTAGATAAAAGTGGTGCTTGGTTTTCTTATA
AAGATAAAAAATTGGGTCAAGGTAGAGAAAATTCAAAAGCTTTCTTAAAAGAAAATCCAGAAATAGCTGATGAAATTACC
AAAGAAATTCAAAATTCTATGGGTATAGAAGGCATGATTAGCAGTAGCGAAGATGAAGAAGGAGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A0Q2IZL1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	97.085	100	0.971
recA	Helicobacter pylori 26695	77.551	100	0.776
recA	Helicobacter pylori strain NCTC11637	77.259	100	0.773
recA	Neisseria gonorrhoeae MS11	65.103	99.417	0.647
recA	Neisseria gonorrhoeae MS11	65.103	99.417	0.647
recA	Neisseria gonorrhoeae strain FA1090	65.103	99.417	0.647
recA	Glaesserella parasuis strain SC1401	63.265	100	0.633
recA	Acinetobacter baylyi ADP1	63.265	100	0.633
recA	Acinetobacter baumannii D1279779	62.682	100	0.627
recA	Ralstonia pseudosolanacearum GMI1000	63.72	95.627	0.609
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.952	96.793	0.609
recA	Pseudomonas stutzeri DSM 10701	63.914	95.335	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	63.303	95.335	0.604
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.58	94.461	0.601
recA	Vibrio cholerae strain A1552	63.58	94.461	0.601
recA	Streptococcus pneumoniae D39	58.358	99.417	0.58
recA	Streptococcus pneumoniae Rx1	58.358	99.417	0.58
recA	Streptococcus pneumoniae R6	58.358	99.417	0.58
recA	Streptococcus pneumoniae TIGR4	58.358	99.417	0.58
recA	Streptococcus mitis NCTC 12261	57.31	99.708	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	56.433	99.708	0.563
recA	Streptococcus pyogenes NZ131	57.879	96.21	0.557
recA	Streptococcus mitis SK321	57.751	95.918	0.554
recA	Streptococcus mutans UA159	57.402	96.501	0.554
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.025	94.461	0.548
recA	Lactococcus lactis subsp. cremoris KW2	56.839	95.918	0.545