Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | AM442_RS13920 | Genome accession | NZ_CP026711 |
| Coordinates | 2866470..2867519 (+) | Length | 349 a.a. |
| NCBI ID | WP_000344169.1 | Uniprot ID | N9L2B2 |
| Organism | Acinetobacter baumannii strain AR_0063 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2810079..2867519 | 2866470..2867519 | within | 0 |
Gene organization within MGE regions
Location: 2810079..2867519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM442_RS13575 (AM442_13570) | - | 2810079..2812229 (+) | 2151 | WP_024437161.1 | Mu transposase C-terminal domain-containing protein | - |
| AM442_RS13580 (AM442_13575) | - | 2812286..2813041 (+) | 756 | WP_024437160.1 | AAA family ATPase | - |
| AM442_RS13585 (AM442_13580) | - | 2813044..2813718 (+) | 675 | WP_024437159.1 | hypothetical protein | - |
| AM442_RS13590 (AM442_13585) | - | 2813715..2813960 (+) | 246 | WP_024437158.1 | hypothetical protein | - |
| AM442_RS13595 (AM442_13590) | - | 2813926..2814288 (+) | 363 | WP_049867412.1 | LysR family transcriptional regulator | - |
| AM442_RS13600 (AM442_13595) | - | 2814297..2814509 (+) | 213 | WP_024437156.1 | TraR/DksA C4-type zinc finger protein | - |
| AM442_RS13605 (AM442_13600) | - | 2814512..2814742 (+) | 231 | WP_024437155.1 | hypothetical protein | - |
| AM442_RS13610 (AM442_13605) | - | 2814742..2815245 (+) | 504 | WP_024437154.1 | host-nuclease inhibitor Gam family protein | - |
| AM442_RS13615 (AM442_13610) | - | 2815269..2815577 (+) | 309 | WP_024437153.1 | HU family DNA-binding protein | - |
| AM442_RS20015 | - | 2815659..2815808 (+) | 150 | WP_162830741.1 | hypothetical protein | - |
| AM442_RS13625 (AM442_13620) | - | 2815870..2816073 (+) | 204 | WP_024437152.1 | hypothetical protein | - |
| AM442_RS13630 (AM442_13625) | - | 2816073..2816504 (+) | 432 | WP_024437151.1 | hypothetical protein | - |
| AM442_RS13635 (AM442_13630) | - | 2816485..2816925 (+) | 441 | WP_024437150.1 | gp16 family protein | - |
| AM442_RS13640 (AM442_13635) | - | 2816882..2817316 (+) | 435 | WP_024437149.1 | Mor transcription activator family protein | - |
| AM442_RS13645 (AM442_13640) | - | 2817437..2817937 (+) | 501 | WP_024437148.1 | glycoside hydrolase family 108 protein | - |
| AM442_RS13650 (AM442_13645) | - | 2817934..2818293 (+) | 360 | WP_024437147.1 | hypothetical protein | - |
| AM442_RS13655 (AM442_13650) | - | 2818290..2818631 (+) | 342 | WP_024437146.1 | hypothetical protein | - |
| AM442_RS13660 (AM442_13655) | - | 2818631..2818942 (+) | 312 | WP_024437145.1 | hypothetical protein | - |
| AM442_RS13665 (AM442_13660) | - | 2818951..2819499 (+) | 549 | WP_024437144.1 | DUF3486 family protein | - |
| AM442_RS13670 (AM442_13665) | - | 2819496..2821055 (+) | 1560 | WP_024437143.1 | hypothetical protein | - |
| AM442_RS13675 (AM442_13670) | - | 2821052..2821483 (-) | 432 | WP_049867416.1 | hypothetical protein | - |
| AM442_RS19925 | - | 2821507..2821842 (-) | 336 | WP_050575752.1 | hypothetical protein | - |
| AM442_RS13685 (AM442_13680) | - | 2821852..2822619 (-) | 768 | WP_171519081.1 | DUF4145 domain-containing protein | - |
| AM442_RS13690 (AM442_13685) | - | 2822816..2823583 (+) | 768 | WP_024437141.1 | DNA adenine methylase | - |
| AM442_RS13695 (AM442_13690) | - | 2823659..2825233 (+) | 1575 | WP_024437140.1 | DUF935 domain-containing protein | - |
| AM442_RS13700 (AM442_13695) | - | 2825233..2826546 (+) | 1314 | WP_024437139.1 | phage minor head protein | - |
| AM442_RS13705 (AM442_13700) | - | 2826648..2827124 (+) | 477 | WP_024437138.1 | phage virion morphogenesis protein | - |
| AM442_RS13710 (AM442_13705) | - | 2827311..2828372 (+) | 1062 | WP_024437137.1 | phage protease | - |
| AM442_RS13715 (AM442_13710) | - | 2828391..2828816 (+) | 426 | WP_024437136.1 | hypothetical protein | - |
| AM442_RS13720 (AM442_13715) | - | 2828816..2829748 (+) | 933 | WP_024437135.1 | Mu-like prophage major head subunit gpT family protein | - |
| AM442_RS13725 (AM442_13720) | - | 2829752..2830186 (+) | 435 | WP_024437134.1 | gp436 family protein | - |
| AM442_RS13730 (AM442_13725) | - | 2830183..2830773 (+) | 591 | WP_024437133.1 | phage protein Gp37 | - |
| AM442_RS13735 (AM442_13730) | - | 2830776..2831123 (+) | 348 | WP_024437132.1 | hypothetical protein | - |
| AM442_RS20330 (AM442_13735) | - | 2831135..2831623 (+) | 489 | Protein_2657 | SGNH/GDSL hydrolase family protein | - |
| AM442_RS13745 (AM442_13740) | - | 2833090..2834151 (+) | 1062 | WP_024437130.1 | hypothetical protein | - |
| AM442_RS13750 (AM442_13745) | - | 2834154..2834963 (+) | 810 | WP_024437129.1 | phage tail sheath C-terminal domain-containing protein | - |
| AM442_RS13755 (AM442_13750) | - | 2835083..2835460 (+) | 378 | WP_024437128.1 | hypothetical protein | - |
| AM442_RS13760 (AM442_13755) | - | 2835471..2835812 (+) | 342 | WP_024437127.1 | hypothetical protein | - |
| AM442_RS13765 (AM442_13760) | - | 2835812..2836021 (+) | 210 | WP_024437126.1 | hypothetical protein | - |
| AM442_RS20335 | - | 2836025..2836300 (+) | 276 | WP_372340052.1 | hypothetical protein | - |
| AM442_RS13770 (AM442_13765) | - | 2836388..2838205 (+) | 1818 | WP_370529624.1 | phage tail tape measure protein | - |
| AM442_RS13775 (AM442_13770) | - | 2838248..2838838 (+) | 591 | WP_024437125.1 | hypothetical protein | - |
| AM442_RS13780 (AM442_13775) | - | 2838909..2840084 (+) | 1176 | WP_024437124.1 | DNA circularization protein | - |
| AM442_RS13785 (AM442_13780) | - | 2840074..2841129 (+) | 1056 | WP_024437123.1 | phage baseplate assembly protein | - |
| AM442_RS13790 (AM442_13785) | - | 2841126..2841611 (+) | 486 | WP_024437122.1 | phage baseplate assembly protein | - |
| AM442_RS13795 (AM442_13790) | - | 2841619..2841981 (+) | 363 | WP_024437121.1 | phage GP46 family protein | - |
| AM442_RS13800 (AM442_13795) | - | 2841985..2843031 (+) | 1047 | WP_024437120.1 | baseplate J/gp47 family protein | - |
| AM442_RS13805 (AM442_13800) | - | 2843028..2843564 (+) | 537 | WP_024437119.1 | putative phage tail protein | - |
| AM442_RS13810 (AM442_13805) | - | 2843561..2845099 (+) | 1539 | WP_024437118.1 | tail protein | - |
| AM442_RS13815 (AM442_13810) | - | 2845676..2846140 (+) | 465 | WP_000163427.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| AM442_RS13820 (AM442_13815) | - | 2846331..2846546 (+) | 216 | WP_001129189.1 | hypothetical protein | - |
| AM442_RS13830 (AM442_13825) | - | 2848039..2850132 (+) | 2094 | WP_000203165.1 | EAL domain-containing protein | - |
| AM442_RS13835 (AM442_13830) | - | 2850258..2850701 (+) | 444 | WP_000120225.1 | universal stress protein | - |
| AM442_RS13840 (AM442_13835) | - | 2850756..2852198 (-) | 1443 | WP_001032866.1 | glucose/sorbosone family PQQ-dependent dehydrogenase | - |
| AM442_RS13845 (AM442_13840) | - | 2852553..2853182 (+) | 630 | WP_000332533.1 | SOS response-associated peptidase family protein | - |
| AM442_RS13850 (AM442_13845) | - | 2853429..2854883 (+) | 1455 | WP_000957167.1 | SulP family inorganic anion transporter | - |
| AM442_RS13855 (AM442_13850) | - | 2854931..2856109 (-) | 1179 | WP_001026402.1 | S8 family peptidase | - |
| AM442_RS20235 | - | 2856341..2856454 (-) | 114 | WP_085916944.1 | hypothetical protein | - |
| AM442_RS13860 (AM442_13855) | - | 2857324..2858070 (-) | 747 | WP_001233774.1 | alpha/beta hydrolase | - |
| AM442_RS13865 (AM442_13860) | - | 2858078..2859484 (-) | 1407 | WP_000093788.1 | amino acid permease | - |
| AM442_RS13870 (AM442_13865) | kynU | 2859525..2860775 (-) | 1251 | WP_000631150.1 | kynureninase | - |
| AM442_RS13875 (AM442_13870) | gigD | 2860922..2861371 (+) | 450 | WP_001046785.1 | Lrp/AsnC family transcriptional regulator GigD | - |
| AM442_RS13880 (AM442_13875) | - | 2861417..2861953 (+) | 537 | WP_000573225.1 | GNAT family N-acetyltransferase | - |
| AM442_RS13885 (AM442_13880) | - | 2862005..2862298 (-) | 294 | WP_000689659.1 | hypothetical protein | - |
| AM442_RS13890 (AM442_13885) | - | 2862413..2862649 (-) | 237 | WP_000525037.1 | hypothetical protein | - |
| AM442_RS13900 (AM442_13895) | - | 2863634..2863993 (-) | 360 | WP_000798363.1 | YcgJ family protein | - |
| AM442_RS13905 (AM442_13900) | - | 2864177..2865109 (-) | 933 | WP_001040037.1 | IS5-like element ISAha2 family transposase | - |
| AM442_RS13910 (AM442_13905) | - | 2865214..2865900 (+) | 687 | WP_001045482.1 | HAD-IA family hydrolase | - |
| AM442_RS13915 (AM442_13910) | - | 2865884..2866324 (+) | 441 | WP_000040959.1 | RNA-binding S4 domain-containing protein | - |
| AM442_RS13920 (AM442_13915) | recA | 2866470..2867519 (+) | 1050 | WP_000344169.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 37891.25 Da Isoelectric Point: 4.7769
>NTDB_id=271954 AM442_RS13920 WP_000344169.1 2866470..2867519(+) (recA) [Acinetobacter baumannii strain AR_0063]
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENTQIAEEIER
NIREQLLTTGTNGAVQIEDEEEPDLLLES
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENTQIAEEIER
NIREQLLTTGTNGAVQIEDEEEPDLLLES
Nucleotide
Download Length: 1050 bp
>NTDB_id=271954 AM442_RS13920 WP_000344169.1 2866470..2867519(+) (recA) [Acinetobacter baumannii strain AR_0063]
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAGCAATTTGGTAAAAATACGGTTATGCG
TCTTGGTGATAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCATTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATCGAAATTTATGGTCCTGAATCTTCTGGTAAAACCACAATGACATTGCAAGCAATTGCT
CAATGTCAAAAATCTGGTGGTACATGTGCCTTCATTGATGCTGAGCACGCCCTAGACCCTCAATATGCACGCAAACTTGG
TGTAGATATTGATAACCTACTTGTTTCACAACCCGACAATGGTGAGCAAGCACTTGAAATTGCTGACATGCTTGTCCGTT
CAGGCGCAATTGATTTAATCGTTGTGGACTCGGTAGCTGCACTTACACCTAAAGCAGAAATCGAAGGTGAGATGGGCGAC
TCTCATATGGGTCTACAAGCGCGTCTTATGAGCCAGGCACTTCGTAAAATTACGGGTAATGCTAAACGTTCAAACTGTAT
GGTTATCTTCATTAACCAGATTCGTATGAAAATTGGTGTTATGTTTGGTAGCCCAGAAACTACCACTGGTGGTAACGCTC
TTAAATTCTACGCTTCAGTTCGTTTAGATATTCGTCGTATCGGTCAAGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAACAAAATGGCTCCTCCGTTTAAAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAACTAGGTGAACTTGTAGATTTAGCTGTACAACAGGATATCGTACAGAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAAAACAATGTAATTCGCTATTTTGAAGAAAATACTCAAATAGCTGAAGAAATTGAACGT
AATATCCGTGAACAATTGCTGACTACAGGCACAAATGGTGCAGTTCAAATTGAAGATGAAGAAGAGCCAGATCTTTTATT
AGAATCGTAA
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAGCAATTTGGTAAAAATACGGTTATGCG
TCTTGGTGATAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCATTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATCGAAATTTATGGTCCTGAATCTTCTGGTAAAACCACAATGACATTGCAAGCAATTGCT
CAATGTCAAAAATCTGGTGGTACATGTGCCTTCATTGATGCTGAGCACGCCCTAGACCCTCAATATGCACGCAAACTTGG
TGTAGATATTGATAACCTACTTGTTTCACAACCCGACAATGGTGAGCAAGCACTTGAAATTGCTGACATGCTTGTCCGTT
CAGGCGCAATTGATTTAATCGTTGTGGACTCGGTAGCTGCACTTACACCTAAAGCAGAAATCGAAGGTGAGATGGGCGAC
TCTCATATGGGTCTACAAGCGCGTCTTATGAGCCAGGCACTTCGTAAAATTACGGGTAATGCTAAACGTTCAAACTGTAT
GGTTATCTTCATTAACCAGATTCGTATGAAAATTGGTGTTATGTTTGGTAGCCCAGAAACTACCACTGGTGGTAACGCTC
TTAAATTCTACGCTTCAGTTCGTTTAGATATTCGTCGTATCGGTCAAGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAACAAAATGGCTCCTCCGTTTAAAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAACTAGGTGAACTTGTAGATTTAGCTGTACAACAGGATATCGTACAGAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAAAACAATGTAATTCGCTATTTTGAAGAAAATACTCAAATAGCTGAAGAAATTGAACGT
AATATCCGTGAACAATTGCTGACTACAGGCACAAATGGTGCAGTTCAAATTGAAGATGAAGAAGAGCCAGATCTTTTATT
AGAATCGTAA
Similar proteins
Only experimentally validated proteins are listed.